Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0465 ATGACCATTGATATGCCACCAACCATGGCCCAAAGTGTGAGAACAAATAGATCTTCCTTTAGCTCAAGCAATGGCAATGGGGATAATACCCCTTTACATAGTTATGCTTCATTTAGCAATGGTGATGACTATGACAGTGATACTCTCAATTTTGCACCACCCACGCCTTCAAATTTATCGATGGCTATTCCAGAAGAACTTGCTGGAGCTATACCCTTGATTGATAGATTCCAGGTGGAAGGATTTTTAAAACAGATGCAAAAACAAATTCAATCCGCTGGGAAACGTGGATTTTTTTCTAGAAGATCTGTGGGGCCCCAAGTTCGAGAGAGATTTACAATTAAGGACATGCTTTGCTTCCAGAAGGATCCAATACCAACATCGTTGCTTAAGCTAAATGGCGATTTGGCAAGCCGGGCAACAAAATTGTTCCAAATAGTTTTGAAATATATGGGAGTAGATTCATCTGATCATGTAACTCCAATAGGATTAGATGAACAAGTTGAGCTTGTAGGTAAACTGTACAAGCAAAGTTTGAAATGTTCAGAACTGCGAGATGAACTTTTTGTACAAATTTCAAAACAAACAAGAAATAACCCTGAGAGGGAATGCTTGATTAAAGCATGGGAGCTATTGTACTTGTGTGCATCCTGCATGCCTCCTAGTAAAGATATTGGAGCATATCTGTCAGAATATGTTCATAATGTGGCACATGCCGTGACTACTGATCCTGAGATTCGAGCCCTTGCATTAAATGCATTAAATGCTTTGAAACGCTCGGTCAAAGCTGGTCACAGGCATACAATACCTGGGCCTAAAGAGATTGAAGCTCTGTTGACCGGGAGAAAGCTTACAACTATAGTGTTCTTCTTGGATGAAACATTTGAAGAGATTACATATGACATGTCAACAACAGTTGCTGATGCTGTTGAGGAACTTGCTGGGATCATTAAACTGACAACATACTCTAGCTTCAGCCTGTTTGAATGCCATAAAGTTTTAAGTGGTTCTAAATCAACTGATTCTGGGAATGAGGAGTACACTGGGCTAGATGATAATAAATATATTGGGGATCTCCTGTCGGAATTTAAGGCAGCAAAAGATCGAAATAAGGGAGAAATTTTGCACTGTAAACTGATATACAAGAAAAAGCTATTTCGCGAATCAGATGAAGCTGTGACAGAGCCAATGTTTGTGCAGTTATCCTACGTACAATTACAGCATGATTATATTTTGGGTAATTATCCTATTGGAAAGGATGATGCTTCCCAGCTATCTGCATTGCAAATCTTGGCCGAGATAGGATTTGTTAGAAGACCTGAATCATGCACTGACTGGAATTCATTTCTGGAGCGATTTCTGCCTAGACAAATTGCAATGACACGAGGAAAACGGGAATGGGAATTGGACATTCTTTCTTGCTATCACTCACTGGAGCATCTGACAAAAGATGACGCAAGGCAGCAATTTCTTCATATTCTGAGAACACTTCCATACGGGAATTCTATTTTCTTCAATGTTCGTAAGATTGATGATCCTATTGGACTTCTCCCTGGACGAATAATATTGGGAATTAATAAGAGAGGGGTTCATTTTTTCCGCCCAGTTCCAAAAGAATACATGCATTCAGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATACAGCAGTATTTTTTAAAATGAGAGTTGCAGGTGCTCTTCACATTTTCCAATTTGAAACCAAACAGGGAGAAGAAATTTGTGTAGCTCTTCAAACCCATATAAATGATGTAATGTTGCGCCGCTATTCCAAAGCACGGCCCTCTGCTCCTGATTCTTTAAATGAAGATATTTCTAGTAATTTTAAGCCCTCGGATTTGGAATCATATGAGAAGCGTGTTAAAGATTTGTCTAAAGTTGTTGAAGAGTCTCAAAGAAATGCCGATCAATTGCTAGAACAATTGCATGAGAAGCAAAAGGAAGAAGAGAAAATGCTTGGAGAATTGGAGGACTTGAAAGAATCCTTAAAAGCCGATAAACATAGTCTTGCAGAAATTACAAATGACCGTGATAAGCTCAGATCTTTATGTGATGAGAAAGACATGGCACTTCAGGCTACAATTCTAGAGAAAAAGAACATGGAAGCAAGGATGGCCAAGTTGACTAATATGGTGATAGAAAACACTACCAAAAAGGACATTGTTGGAGCAAATAGCCAAGCCTTACAAAAGCTTGAAGATGGGCTAAAATTTTGTAAAGACGAGCTGCTTGTTGCTGAAGATACTATCAAAAGCTTAACAAATGAAAAATTGATTTTGGAACAAAAGCTGTTTGGGCTTGAGAAGAAGAATGGGGAAGAGAAGAGTTCTATTCAACGGAAACTTGAGCAAGAACGCCAAACTCTGAAGTCTCAAGTGCACGATCTTGAAAGAAAACTTGAAATTTTCAGACAAGAATTATTTGCAGCTGAATCTACACTTACTGTCAGAGACACTGAATTGGATGCCTTGAAGAAAAATTTAAGAGAACTAGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAACGAACAAACAGCTTCGATATTGAAGATGCAAGGGGCTCAACTAGCTGAATTTGAAGTGCTTTATAAGGAAGAACAAGTTCTACGAAAGCGATACTTCAATATGATCGAAGATATGAAAGGCAAGATAAGAGTTTACTGTCGAGTGAGACCTCTTAGTGGAAAGGAGATTGTAGAGAAAGAAGGAAATGCTCTTACTACTGTAGATGAGTTTACAGTTGAACATCTCTGGAAAGATAATAAACCAAAACAGCAGATGTATGATCGGGTGTTCGATGGCGATGCTAGTCAACAAGATGTGTTTGAGGATACAAAGTACTTGGTGCAATCTGCTGTAGATGGTTATAATGTCTGCATATTTGCCTATGGTCAAACTGGCTCTGGAAAGACATATACAATCTACGGATCCGAAAACAACCCCGGGCTTACCCCGCGTGCCACTGCTGAACTTTTTAAGATTTTAAGGAGAGATAGTAACAAGTTTTCTTTTTCCTTGAAGGCATACATGTTGGAGTTATATCAAGATACACTTGTGGATCTTCTGTTACCTAAGAATGCAAAGCGTTTAAAATTGGATATCAAGAAGGATTTAAAGGGAATGGTAACTGTGGAAAATGTAACAACTGTGTCCGTTCCTACACTGGAAGAATTGAATATCATAATTCAGAAAGGATCTGAACGGCGACATACCTCAGGGACACAAATGAATGATGAAAGTTCAAGATCTCATCTCATACTATCAATTGTAATTGAAAGTACCAACCTTCAAAGTCAATCAGCTGCTAGGGGAAAGCTAAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTAAAAAAGTCAGGTTCTGAAGGTAGTCAACTAAAAGAAGCTCAAAGTATAAACAAATCATTATCAGCATTAGGAGATGTTATTAGTGCTTTGGCTTCTGGTGGTCAACACATACCTTACAGGAATCACAAGTTAACCATGTTGATGAGTGATTCACTTGGGGGTAATGCCAAAACTCTTATGTTTGTGAATGTATCTCCAGCAGAATCAAACTTGGATGAGACACACAACTCTCTTATGTATGCATCAAGAGTGAGATCAATAGTGAATGATCCAAGCAAAAATGTTTCTTCAAAAGAGATAGCTAGACTGAAGAAACTAGTTGCATACTGGAAAGAGCAAGCTGGTAGAAGAGGGGAAGATGATGATTTAGAAGAAATTCAAGAAGAAAGACCAACTAAAGACAAGAATGATGGATGTAATGAGATCTCACAGGTTCCAAGATCTCAAAGGCTTTAA 3840 0.3854 MTIDMPPTMAQSVRTNRSSFSSSNGNGDNTPLHSYASFSNGDDYDSDTLNFAPPTPSNLSMAIPEELAGAIPLIDRFQVEGFLKQMQKQIQSAGKRGFFSRRSVGPQVRERFTIKDMLCFQKDPIPTSLLKLNGDLASRATKLFQIVLKYMGVDSSDHVTPIGLDEQVELVGKLYKQSLKCSELRDELFVQISKQTRNNPERECLIKAWELLYLCASCMPPSKDIGAYLSEYVHNVAHAVTTDPEIRALALNALNALKRSVKAGHRHTIPGPKEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLTTYSSFSLFECHKVLSGSKSTDSGNEEYTGLDDNKYIGDLLSEFKAAKDRNKGEILHCKLIYKKKLFRESDEAVTEPMFVQLSYVQLQHDYILGNYPIGKDDASQLSALQILAEIGFVRRPESCTDWNSFLERFLPRQIAMTRGKREWELDILSCYHSLEHLTKDDARQQFLHILRTLPYGNSIFFNVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYMHSAELRDIMQFGSSNTAVFFKMRVAGALHIFQFETKQGEEICVALQTHINDVMLRRYSKARPSAPDSLNEDISSNFKPSDLESYEKRVKDLSKVVEESQRNADQLLEQLHEKQKEEEKMLGELEDLKESLKADKHSLAEITNDRDKLRSLCDEKDMALQATILEKKNMEARMAKLTNMVIENTTKKDIVGANSQALQKLEDGLKFCKDELLVAEDTIKSLTNEKLILEQKLFGLEKKNGEEKSSIQRKLEQERQTLKSQVHDLERKLEIFRQELFAAESTLTVRDTELDALKKNLRELEELREMKEDIDRKNEQTASILKMQGAQLAEFEVLYKEEQVLRKRYFNMIEDMKGKIRVYCRVRPLSGKEIVEKEGNALTTVDEFTVEHLWKDNKPKQQMYDRVFDGDASQQDVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTYTIYGSENNPGLTPRATAELFKILRRDSNKFSFSLKAYMLELYQDTLVDLLLPKNAKRLKLDIKKDLKGMVTVENVTTVSVPTLEELNIIIQKGSERRHTSGTQMNDESSRSHLILSIVIESTNLQSQSAARGKLSFVDLAGSERVKKSGSEGSQLKEAQSINKSLSALGDVISALASGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKEQAGRRGEDDDLEEIQEERPTKDKNDGCNEISQVPRSQRL* 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0465 1279 CDD FERM_C_KCBP 501 605 - -
Lan17g0465 1279 ProSitePatterns Kinesin motor domain signature. 1115 1126 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan17g0465 1279 SUPERFAMILY Second domain of FERM 382 499 IPR035963 -
Lan17g0465 1279 SMART B41_5 280 504 IPR019749 -
Lan17g0465 1279 MobiDBLite consensus disorder prediction 1 37 - -
Lan17g0465 1279 Gene3D - 396 497 IPR014352 -
Lan17g0465 1279 ProSiteProfiles Kinesin motor domain profile. 894 1215 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0465 1279 Pfam MyTH4 domain 173 277 IPR000857 GO:0005856
Lan17g0465 1279 Gene3D Kinesin motor domain 881 1217 IPR036961 -
Lan17g0465 1279 SUPERFAMILY PH domain-like 504 592 - -
Lan17g0465 1279 Pfam FERM central domain 390 502 IPR019748 -
Lan17g0465 1279 Coils Coil 622 684 - -
Lan17g0465 1279 Coils Coil 787 859 - -
Lan17g0465 1279 MobiDBLite consensus disorder prediction 1242 1279 - -
Lan17g0465 1279 Pfam Kinesin motor domain 900 1215 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0465 1279 PANTHER KINESIN-RELATED 615 1264 IPR027640 GO:0003777|GO:0007018
Lan17g0465 1279 Coils Coil 744 778 - -
Lan17g0465 1279 MobiDBLite consensus disorder prediction 1242 1265 - -
Lan17g0465 1279 Gene3D - 502 608 IPR011993 -
Lan17g0465 1279 Gene3D - 1218 1266 - -
Lan17g0465 1279 Gene3D MyTH4 domain 100 281 IPR038185 -
Lan17g0465 1279 CDD FERM_B-lobe 399 497 IPR019748 -
Lan17g0465 1279 ProSiteProfiles MyTH4 domain profile. 120 279 IPR000857 GO:0005856
Lan17g0465 1279 SMART MyTH4_1 120 279 IPR000857 GO:0005856
Lan17g0465 1279 ProSiteProfiles FERM domain profile. 284 598 IPR000299 GO:0005856
Lan17g0465 1279 PRINTS Kinesin heavy chain signature 966 987 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0465 1279 PRINTS Kinesin heavy chain signature 1085 1102 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0465 1279 PRINTS Kinesin heavy chain signature 1116 1134 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0465 1279 PRINTS Kinesin heavy chain signature 1165 1186 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0465 1279 Coils Coil 699 719 - -
Lan17g0465 1279 SUPERFAMILY Prismane protein-like 837 898 IPR011254 GO:0003824|GO:0016491
Lan17g0465 1279 CDD KISc_C_terminal 892 1217 - -
Lan17g0465 1279 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 615 1264 - -
Lan17g0465 1279 Gene3D - 283 387 - -
Lan17g0465 1279 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 894 1242 IPR027417 -
Lan17g0465 1279 SMART kinesin_4 892 1223 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0465 Lan-Chr17 3531930 3540609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0465 35 1265 Calmodulin-binding Proteins AT5G65930 72.097 0.0 1813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0465 - - gmx:100782701 2050.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0465 17 3531930 3540609 Lan18g0072 18 532602 541801 LSH