Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0464 ATGGAGTTTGAACCTCTGAGTATGGGTAATGACGTTATTGAATTTGATATGATTGGTTTTGGGGATGATGCTGGCATTGACATTGAGAACCATGTTGATGATAATGACCTTGATAGTGGTGACAATGTTCCTATATATACTGGTACTTCCAGTATAGGTGCCACTATGGGACCTTATATCCCTGGAGTGGACACAAATCTCGAACCGTATCAGGGTATGGAGTTTGAATCAGAAGAGGCTGCTAAGGCCTTTTACAATTCCTATGCTCGTCGTGTTGGTTTTAGTACACGAGTTAGCATGTCTCGCCGCTCCAGGCGTGACGGTGCTATAATTCAGAGGTCTTTTGTGTGTGCCAAAGAAGGTTTTCGTGCAGGGAAGGAGAAGAATTCTCTTGATGAAAGAGTCAAGAGGCCTCGTGCTGAAACCCGTGTTGGTTGCAAGGCCATGTTGGTTGTGAAAATTCAAGATTCTGGCACCTGGGTTGTTTCTTCATTTGTCAAGGAACATAACCATGAACTGGTTCCACCAGATAAGGTGCATTGCCTTCGCTCTCACCGCCATGTTTCTGGTCCAGCTAAGTCGTTGATTGATACTTTGCAGGGTGCTGGCATAGGGCCCAGTGGAATTATGTCTGCACTTATCAAAGAATACGGTGGAATCAGCAATATTGGTTTCACTGAGCGTGATTGTAGGAATTATATGAGGAGCAGTAGGCAAAGGACACTTGGTGGTGACACTCAAATCCTCTTAGATTACTTGAAGAGCAAACAAGCAGATAATCCGTCATTTTTCTTTGCCGTACAGGGTGATGAAGATCAATGCATGAGCACTATCTTGTGGGTCGATCCTAAGGCAAGGACTAACTACACTTATTTTGGTGACACTGTAACCTTTGACACTACATATAGATCGAACCGCTATAGATTGCCTTTTGCACCTTTCACTGGTGTAAATCATCATGGACAGCCTGTATTATTTGGTTGTGCTTTTCTCGTAAATGAATCCGAGGCATCTTTTATATGGCTATTCAAAACCTGGCTTGAAGCAATGTCAGGACGACCTCCAGTTTCAATTACTACTAATCATGACAGGGTGATTCGTGCAGCCGTCAACCATGTCTTTCCTGATACCCGACATCGGTTCTGCAAGTGGAACATTTTCAAAGAATGCCAAGAGAAGTTATCTCATGTGCTTTCCGAACACCATAATTTTGAACCTGATCTCCATAAATGTGTTAACCTGACAGATTCCATCGAGGAGTTTGAGTCTTGCTGGTCCTCTCTAATTGACAGTTATGGTGTCCGAGAACATGAATGGCTCCAAACAATTTATGGTGATAGGTGGCAGTGGGTTCCAGTGTACTTGAGGGACACATTTTTTGCGGAAATGTCAATAACACAACGAAGTGATAGCATTAACTCTTACTTTGACGGATATATCAATGCATCAACAACACTTCAGGTTTTTGTTAAGCAGTACGAGAAGGCTTTGGAAAGCCGTTATGAGAAAGAAGTCAAAGCTGATTATGACACAATAAACACTGCTCCCGTTCTGAAGACTCCATCACCCATGGAAAAACAGGCAGCTGGAGTTTACACAAGAAGATTGTTTATCAAATTTCAAGAAGAGTTGGTTGATACATTAACTTTCTTGGCGAACAAAATAAATGAAGAAGAAATGGTTGCCATGTATAGAGTAGCCAAATATGGGGAAATTCACAAGGCCTACATTGTCAAATTTAATTTTTTTGAGGCGAAAGCTACTTGTAGTTGCCAGATGTTTGAGTTTTCGGGTCTAGTTTGTAGACATATATTGACCGTTTTTAGGGTGACAAATCTTCTTACTTTACCATCTCATTATATTTTAAAAAGATGGACAAGGAATGCTAAAAGTGGGGTCATATTTGATGAACATACTTCTGATTTGTTAAATGGTGCTCAAGAATCTGCAACTATCCGATACAATAATCTTCGTCGCGAGGCCCTGAAGTTTGTAGATGAGGGAGTAAGCTCTCTGAAAGTCTATGAAGTGGCTATGAGTGCTCTTCAGGAGGCTGCAAATAAAGTGTCACATGCATCAAAGAGTGGTGGAAAACTGGTTATGTCAAATGGAACTTGTAAAGAAGACCTTCATCAGAGCAATGATGCAACTACAAAAGGCTTTGATTCTCAATTTGATACACATCAACCTTCATCTAAGGATGACCAGGAGAGAACAATTGAAAAGTTGACACGGCAACTTGACCGAGTTCGAAGGAAGTGTGATGTTTATAGGTCGAACTTGCTGTCAATTTTAAAAGATATTGAAGAGCAGAAGCTAGAATTATCAGTTAGAGTCCAAAATATTAAGTTAGGAATGAAAGGTTGA 2367 0.4098 MEFEPLSMGNDVIEFDMIGFGDDAGIDIENHVDDNDLDSGDNVPIYTGTSSIGATMGPYIPGVDTNLEPYQGMEFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRAGKEKNSLDERVKRPRAETRVGCKAMLVVKIQDSGTWVVSSFVKEHNHELVPPDKVHCLRSHRHVSGPAKSLIDTLQGAGIGPSGIMSALIKEYGGISNIGFTERDCRNYMRSSRQRTLGGDTQILLDYLKSKQADNPSFFFAVQGDEDQCMSTILWVDPKARTNYTYFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLVNESEASFIWLFKTWLEAMSGRPPVSITTNHDRVIRAAVNHVFPDTRHRFCKWNIFKECQEKLSHVLSEHHNFEPDLHKCVNLTDSIEEFESCWSSLIDSYGVREHEWLQTIYGDRWQWVPVYLRDTFFAEMSITQRSDSINSYFDGYINASTTLQVFVKQYEKALESRYEKEVKADYDTINTAPVLKTPSPMEKQAAGVYTRRLFIKFQEELVDTLTFLANKINEEEMVAMYRVAKYGEIHKAYIVKFNFFEAKATCSCQMFEFSGLVCRHILTVFRVTNLLTLPSHYILKRWTRNAKSGVIFDEHTSDLLNGAQESATIRYNNLRREALKFVDEGVSSLKVYEVAMSALQEAANKVSHASKSGGKLVMSNGTCKEDLHQSNDATTKGFDSQFDTHQPSSKDDQERTIEKLTRQLDRVRRKCDVYRSNLLSILKDIEEQKLELSVRVQNIKLGMKG* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0464 788 Pfam MULE transposase domain 296 388 IPR018289 -
Lan17g0464 788 Pfam FAR1 DNA-binding domain 84 175 IPR004330 -
Lan17g0464 788 ProSiteProfiles Zinc finger SWIM-type profile. 576 612 IPR007527 GO:0008270
Lan17g0464 788 MobiDBLite consensus disorder prediction 710 739 - -
Lan17g0464 788 Pfam SWIM zinc finger 586 610 IPR007527 GO:0008270
Lan17g0464 788 Coils Coil 733 760 - -
Lan17g0464 788 MobiDBLite consensus disorder prediction 710 727 - -
Lan17g0464 788 SMART 26again6 587 614 IPR006564 GO:0008270
Lan17g0464 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 43 762 IPR031052 GO:0006355
Lan17g0464 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 43 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0464 Lan-Chr17 3528491 3532064 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan17g0464 MULE 4.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0464 - - gmx:100782414 1308.51