Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0447 ATGACTTTTGTTGTTCTCATTCATACTCTTCCTCCTATTCTTTCACACCAATTTTTACCCAGTCAAATACTCTTATTTAGTCAACCCAAATTATCAAGTTCAAGTCTTCTTCTGCCACCTCCAAGTTCCATTTACATGGCTCATTTAGTTTATAATGAAACTCCTTCTTTCGGAGCCTCGCACCATGGCCAGGCTCAACAAATTATTCCATTCCCAACCACCACTTCCACTTCCTTAAGAATTATCCTCTTACATGGCAACTTAGAAATATGGGTCAACCATGCCAAAAACCTTCCTAACTTAGACAAATTTCACAGGACATTGGGAGATATATTTTCCTTACCTAAGAAACTTGGTAGCACAATTGAAACAAGTGATCCATATGTCACTGTCTCTGTAGCGGGTGCTGTCATTGCAAGAACTTTTGTGATCGAAAACGATGAGAATCCTGTTTGGATGCAACACTTTAATGTCCCTGTTGCACATCATGCCTCTGAAGTTCACTTCCTTGTAAAGGATAGTGATGTCGTTGGATCACAGTTAATAGGTGCTGTAGGAATTCCAGTTCAAGATTTATATAATGGTACAAAAGTTGAAGGCTTTTACCCTATCCTTAGTTCTAGTGGAAAGCCTTGTAAGGATGGAGCAGTGTTGAGTTTATCCATTCAATATACCCCTATTGATAAGGTGACCCTTTATAATCATGGTGTAGGTGCTGGTCCTGATTATGAAGGTGTCCCTGGTACATACTTTCCCCTAAGAAAAGGTGGGAATGTAACACTTTATCAAGATGCTCATTTTCATGAAGGTTGTCTCCCAAATTTCAAGGTCAAAGGGGGTGTGAATTATGAGCATAGAAGTTGCTGGCATGATATCTTTGATGCAATTAGTCAGGCCCGCCGATTAGTTTATATCGTGGGGTGGTCTGTGTACTATAATGTTAGTCTTATTCGGGATAATCGCGGAGGAAAAGGCTCCACTTTAGGTGATCTTCTCAAAGCTAAATCACAGGAAGGTGTGAGAGTGTTGCTACTTGTGTGGGATGATCCTACTTCTGGAAGCTTTCTTGGACAAAGGACGGTTGGACTTATGGATACTCATGATGAGGACACTCGCCGATTTTTCAAGCACTCTTCAGTACAGGTACTTCTTTGCCCGCGTGGTGGTGGAAAAGGACATAGCTGGCTTAAAACACAGGAAGCTGGAACAATCTATACCCATCATCAGAAGACAGTTATTATAGATGCTGATGCAGGTCAGAATAAAAGAAAGATTGTAGCTTTCATCGGGGGTCTTGACTTATGTCTGGGCCGATACGATACACCAACACATTCTCTCTATAGGACCTTACAAACAACACACAAAGATGACTTTCATAATCCTAATTTTGAGGCTAAACTGGGCCCTGTTACTGGTTGTCCAAGAGAACCATGGCATGATTTGCACTCCAAAGTTGATGGTCCTGCTGCATATGACATCCTAACCAATTTTGAGGAGCGTTGGTTAAAGGCAACAAAAAAGAGCAGACTTCATAGGATCAAAAGTTCTCACGATGATTCATTGCTAAAAATCGATAGAATCCCTGACATTATGGGTATTGATGAAGTTTCCTGCCTAAATAAACATAACCCGGAAACATGGCATGTCCAGGTATTCCGTTCAATTGATTCCAATTCTGTGAAAGGATTTCCGAAGGAACCGAAAGACGCTATACAAAGGAACTTGGTTTGTGGGAAGAATGTCGTCATAGACATGAGCATACATTCTGCATATGTAAAGGCAATCCGAGCTGCCCAAAAATTCATCTATATCGAGAACCAATACTTTCTTGGCTCATCATTTAATTGGGATTCTCATAAAGACCTTGGTGCAAACAACTTAATTCCAATGGAAATTGCATTAAAAATAGCCAACAAAATCAAACATCATGAAAGATTCTCTGTGTATGTTGTCATTCCCATGTGGCCTGAAGGTGTACCCACAAGTGTATCTACTCAGCGGATTCTCTTTTGGCAGTTCAAAACAATGCAAATGATGTATGAAACGATCTACAAGGCCTTACAAGAGGCTGGGCTCGACAATGTGTATGAACCACAAGACTACTTGAATTTCTTTTGTCTTGGCAATCGTGAGATCTCTGATAATAATGAGAACATTTCAAATGCTGCAAAACGTAATGGACAAAACACTCCTCAGGTACTAGCCCAAAAGAACAGGAGATTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGATACTCGGATCTGCAAATATAAACCAACGGTCGATGGAAGGCACCAGAGACACAGAGATAGCAATGGGAGCATATCAACCTAAACATACGTGGGCAAGCAAACGATCTAAACCTCATGGGCAGGTGCATGGTTATAGAATGTCACTATGGAGTGAGCATATTGGAGGCATTGAAAAATGTTTTGAGGAACCAGAGAGCTTGGAATGTGTAAGAAGGTTAAGGTCATTGGGTGAGTTGAACTGGAAACAATATGCAGCTGAAGAGGTGACAGAAATGAAAAGTCATATATTGAAATATCCAGTTGAAGTTGATTCAAAGGGTAAGGTCAAGCCTCTTCCTGGCTCTGAGACATTCCCTGATGTTGGTGGCAATATAAAGGGAACATTTGTAGTAGTTCAAGAGAATCTTACCATCTAA 2688 0.4044 MTFVVLIHTLPPILSHQFLPSQILLFSQPKLSSSSLLLPPPSSIYMAHLVYNETPSFGASHHGQAQQIIPFPTTTSTSLRIILLHGNLEIWVNHAKNLPNLDKFHRTLGDIFSLPKKLGSTIETSDPYVTVSVAGAVIARTFVIENDENPVWMQHFNVPVAHHASEVHFLVKDSDVVGSQLIGAVGIPVQDLYNGTKVEGFYPILSSSGKPCKDGAVLSLSIQYTPIDKVTLYNHGVGAGPDYEGVPGTYFPLRKGGNVTLYQDAHFHEGCLPNFKVKGGVNYEHRSCWHDIFDAISQARRLVYIVGWSVYYNVSLIRDNRGGKGSTLGDLLKAKSQEGVRVLLLVWDDPTSGSFLGQRTVGLMDTHDEDTRRFFKHSSVQVLLCPRGGGKGHSWLKTQEAGTIYTHHQKTVIIDADAGQNKRKIVAFIGGLDLCLGRYDTPTHSLYRTLQTTHKDDFHNPNFEAKLGPVTGCPREPWHDLHSKVDGPAAYDILTNFEERWLKATKKSRLHRIKSSHDDSLLKIDRIPDIMGIDEVSCLNKHNPETWHVQVFRSIDSNSVKGFPKEPKDAIQRNLVCGKNVVIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSFNWDSHKDLGANNLIPMEIALKIANKIKHHERFSVYVVIPMWPEGVPTSVSTQRILFWQFKTMQMMYETIYKALQEAGLDNVYEPQDYLNFFCLGNREISDNNENISNAAKRNGQNTPQVLAQKNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPKHTWASKRSKPHGQVHGYRMSLWSEHIGGIEKCFEEPESLECVRRLRSLGELNWKQYAAEEVTEMKSHILKYPVEVDSKGKVKPLPGSETFPDVGGNIKGTFVVVQENLTI* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0447 895 Gene3D C2 domain 81 214 IPR035892 -
Lan17g0447 895 Gene3D Endonuclease Chain A 550 794 - -
Lan17g0447 895 SUPERFAMILY Phospholipase D/nuclease 244 509 - -
Lan17g0447 895 PIRSF PLD_plant 73 895 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lan17g0447 895 SMART C2_3c 87 201 IPR000008 -
Lan17g0447 895 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 53 895 - -
Lan17g0447 895 CDD C2_plant_PLD 82 225 - -
Lan17g0447 895 SUPERFAMILY Phospholipase D/nuclease 575 820 - -
Lan17g0447 895 Pfam Phospholipase D C terminal 815 885 IPR024632 -
Lan17g0447 895 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 403 438 IPR001736 GO:0003824
Lan17g0447 895 SMART pld_4 403 438 IPR001736 GO:0003824
Lan17g0447 895 SMART pld_4 741 768 IPR001736 GO:0003824
Lan17g0447 895 Gene3D Endonuclease Chain A 275 525 - -
Lan17g0447 895 Pfam C2 domain 86 204 IPR000008 -
Lan17g0447 895 PANTHER PHOSPHOLIPASE D 53 895 IPR015679 -
Lan17g0447 895 Pfam Phospholipase D Active site motif 742 768 IPR001736 GO:0003824
Lan17g0447 895 Pfam Phospholipase D Active site motif 404 438 IPR001736 GO:0003824
Lan17g0447 895 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 84 227 IPR035892 -
Lan17g0447 895 ProSiteProfiles C2 domain profile. 68 202 IPR000008 -
Lan17g0447 895 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 741 768 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0447 Lan-Chr17 3368910 3374063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0447 78 895 Phospholipase D Gene Family (Wang group) AT2G42010 69.575 0.0 1273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0447 K01115 - gmx:100786241 1478