Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0432 ATGCTAATTGAGCAAAGAGAAGGTGGTACTAACAGTGGGATTACGGTGGTGGGATCGGATGCTCCGGCAGAGTACCATGTAGCTCAAAGGACTGAAAACGATGCTCCGGCAGCTGGATCCGCCGTTTTGACAGCAGTTCCGGCAGCTCAAGGCGGTGTTCCGTCGATGCAGCCGGTGAAGAAGAAGAGAGGTCGGCCGAGAAAGTATGCACCGGACGGCTCAGTGTCCATGGCGTTGTCTCCCAGGCCAATATCTTCTTCAGCTCCGCCGTCGCTGCCGCCGGTGATTGATTTCTCGGCGGAGAGGCGCGGGAAAGTGCGGCCAGTTAGCTCTGTCAGCAAAACCAGATTTGAGGTGGAGAATATAGGTGAATGGGTTCCATGCTCGGTTGGTGCTAATTTTACACCTCATATCATCACTGTTAATTCCGGAGAAGATGTTACTATGAAGATAATATCGTTTTCTCAGCAAGGACCACAAGCTATATGCATTCTTTCTGCAAATGGGGTAATATCAAGTGTCACACTACGTCAGCCTGATTCTTCTGGAGGCACATTGACATATGAGGGACGGTTTGAAATTTTGTCTTTATCCGGCTCATTCATGCCGAATGACAGTGGCGGAACACGGAGCAGATCAGGCGGCATGAGTGTTTCTTTAGCAAGTCCAGATGGTCGTGTTGTAGGTGGTGGAGTAGCTGGTCTATTGGTGGCTGCCGGTCCTGTGCAGGTAGTGGTAGGCAGTTTCTTGGCAGGTAACCAACATGAGAAACCAAAGAAACATAAACTGGAGACATTATCAGCAGCAACACCAACTGCAGCTGTTCCTGTGTCTATTGCTGATCCAGTAACTGTTCTGTCGTCTTCATCTTCGTTCCGGGCAGATAATTGGTCTGTGATTCCAGTACCGACGGATACCAGGAATAACCCAACTGATATTAATGTCTCACTCCCTGGAGGCTAA 963 0.4964 MLIEQREGGTNSGITVVGSDAPAEYHVAQRTENDAPAAGSAVLTAVPAAQGGVPSMQPVKKKRGRPRKYAPDGSVSMALSPRPISSSAPPSLPPVIDFSAERRGKVRPVSSVSKTRFEVENIGEWVPCSVGANFTPHIITVNSGEDVTMKIISFSQQGPQAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAAGPVQVVVGSFLAGNQHEKPKKHKLETLSAATPTAAVPVSIADPVTVLSSSSSFRADNWSVIPVPTDTRNNPTDINVSLPGG* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0432 320 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 249 IPR005175 -
Lan17g0432 320 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 257 - -
Lan17g0432 320 ProSiteProfiles PPC domain profile profile. 131 269 IPR005175 -
Lan17g0432 320 MobiDBLite consensus disorder prediction 1 20 - -
Lan17g0432 320 MobiDBLite consensus disorder prediction 30 96 - -
Lan17g0432 320 Gene3D - 136 271 - -
Lan17g0432 320 CDD DUF296 135 226 IPR005175 -
Lan17g0432 320 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 11 318 - -
Lan17g0432 320 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 11 318 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0432 Lan-Chr17 3229766 3234850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0432 9 317 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 61.404 2.56e-129 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0432 - - gmx:100801730 432.95