Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0422 ATGGAGGAGCAGAACGGAGGAGAAGATAACAGAGAACTTTACGCACTCTTGAACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTCTATCACCCTGACAAATACCAAGATTTTCACATGAAAGATATTGTTACGGAGAATTTCCAACGGATATGTGAAGCGTATGAGATATTGTCAGATTCAAATAAAAGGCAAATATATGATATCTATGGTATGGAAGGGTTGAATTCTTATTCTGGTTTCGAACTTGGTCTGAGGCTTGATAAAGCTGAAGAAATCAAGGCTGAGTTAGAGAGATCGAAGAAAATGAAGAAACGCCAAAAATTGCTGACTCATTTTCAATCTTCGGGTACAATTCTGGCAAATATGTCTGTGCCACACTTTCTAGATGGTGATGGCCTCTTCAGAGGTAATCTGTCATCGTACTCAGCTGCAACAATGGGCATTGCGATGTCTTTGCGAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGACAACTGTCAGAAACAGCAAGTGGACATATACAGATTGCTTTGAGACCACAGTCATCCATAGCTGTTGGCTGGCAAAAGAAAGATGAGAAGAGGCTACTTCTGGAGAAGTAA 636 0.4072 MEEQNGGEDNRELYALLNLSPEASDEEIRKAYRQWAQVYHPDKYQDFHMKDIVTENFQRICEAYEILSDSNKRQIYDIYGMEGLNSYSGFELGLRLDKAEEIKAELERSKKMKKRQKLLTHFQSSGTILANMSVPHFLDGDGLFRGNLSSYSAATMGIAMSLRDGSLNLSNLWTRQLSETASGHIQIALRPQSSIAVGWQKKDEKRLLLEK* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0422 211 Coils Coil 96 119 - -
Lan17g0422 211 PANTHER CHAPERONE PROTEIN DNAJ 13 1 146 IPR042162 -
Lan17g0422 211 PANTHER CHAPERONE PROTEIN DNAJ 13 147 206 IPR042162 -
Lan17g0422 211 SMART dnaj_3 11 72 IPR001623 -
Lan17g0422 211 Gene3D DnaJ domain 1 91 IPR036869 -
Lan17g0422 211 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lan17g0422 211 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lan17g0422 211 PRINTS DnaJ domain signature 52 72 IPR001623 -
Lan17g0422 211 PRINTS DnaJ domain signature 72 91 IPR001623 -
Lan17g0422 211 CDD DnaJ 12 69 IPR001623 -
Lan17g0422 211 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Lan17g0422 211 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Lan17g0422 211 Pfam DnaJ domain 13 77 IPR001623 -
Lan17g0422 211 SUPERFAMILY Chaperone J-domain 9 92 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0422 Lan-Chr17 3140328 3142801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0422 14 79 C2H2 Transcription Factor Family AT1G74250 40.278 4.18e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0422 K09531 - lang:109330696 422.55