Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0418 ATGAGGAGGGTGATGGAAGATGTAGCAATAATAGGAGGGTTAATGGGAGTACAATTTATTTATGCAGGGAATGCTGTGTTAATGAGTTATGCTATGTCATTAGGTCTTACCTCACTTACCATTGTTATTTTCACTTCCCTGGCTACATTCTTTATTCTTTTCCCATTGGCTTTTTGTTTTGAAAGGACCAGTTGGCCTGAAAAATGCAGTTTCAACTTTATTACACAGTTGTTGCTTCTTTCTTTTGGAGGAATAGTTTTCCAGTCTTTTTTCCTTAGAGGAATCAATCTAACTTCGCCAGCAATGGGAACTGCCATGCCAAACATTGCCCCAGGTCTTATCTTCATCATATCATGGGCTTTTGGGTTAGAGAAAGTGAACTTGAGATACAGGAATAGTAAAGTAAAAATCTTAGGAACATTGCTTTGTGTGTTGGGCGCTTTAACAATGAGCATTATGCAAAGCATTTCTGCTCCTGCAACTGAGAATGAAACTACATTTGAATCATCATCAACAGCATCAGATTTCATATTTGACAAGCAAAAGTTAATGGGTTGCTTCTATCTCATTGCTTCTGTTTTCATATTGTCAAGCAACATTGTCCTTCAGGCTTTTGTGCTTGGAGGATTTCCTGCACCAATGTCCTTGAGTGCAATAACATCCTTGTTTGGGGCTTTCATTAGTGCAGGTATTCAGCTAATTGAAGATCACAATGTGGAAACTGGTTGGCCACTTGTGAGTCTTGGAGACCTGATTGGCTATTCTGTTCTGGCAGGTGCAGTGAGTGGAATATGCCTAAGCTTCAACGGTTGGGCACTTAAGAAGAGAGGGCCAGTGTTGGTTTCCATGTTTAGCCCCATTGGCACAGTCTGTTCCGTCATTTTCTCTGTTGTTACACTAGGAGACACTATTAATTTTGGAAGCCTTGCAGGTATGTTCCTCATGTTCACTGGGCTCTACTTGGTTCTTTGGGCCAAAAGAAAAGAAAGTTATGCAAATGGAGATGGCCTAGAAAAACGGCTAGAACCTTGA 1032 0.406 MRRVMEDVAIIGGLMGVQFIYAGNAVLMSYAMSLGLTSLTIVIFTSLATFFILFPLAFCFERTSWPEKCSFNFITQLLLLSFGGIVFQSFFLRGINLTSPAMGTAMPNIAPGLIFIISWAFGLEKVNLRYRNSKVKILGTLLCVLGALTMSIMQSISAPATENETTFESSSTASDFIFDKQKLMGCFYLIASVFILSSNIVLQAFVLGGFPAPMSLSAITSLFGAFISAGIQLIEDHNVETGWPLVSLGDLIGYSVLAGAVSGICLSFNGWALKKRGPVLVSMFSPIGTVCSVIFSVVTLGDTINFGSLAGMFLMFTGLYLVLWAKRKESYANGDGLEKRLEP* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0418 343 Pfam EamA-like transporter family 15 151 IPR000620 GO:0016020|GO:0016021
Lan17g0418 343 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Lan17g0418 343 PANTHER WAT1-RELATED PROTEIN 10 339 - -
Lan17g0418 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
Lan17g0418 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 152 - -
Lan17g0418 343 PANTHER WAT1-RELATED PROTEIN 10 339 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0418 Lan-Chr17 3104304 3108150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0418 3 340 Nodulin-like Gene Family AT5G47470 56.765 5.27e-133 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0418 - - aprc:113870214 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0418 17 3104304 3108150 Lan6g0976 6 9168617 9171782 PCT
Lan17g0418 17 3104304 3108150 Lan17g0947 17 13144365 13148827 PCT
Lan6g0976 6 9168617 9171782 Lan17g0418 17 3104304 3108150 PCT
Lan17g0947 17 13144365 13148827 Lan17g0418 17 3104304 3108150 PCT