Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0410 ATGTGCCGCCAAAATTCTCACCGTTCTGGTGACGAAGAAATTGAAGCTGATGAGAGCCTTTTGATTTATTGCAAGCCTGTTGAACTCTACAATATTCTATACCGCCGTGCTCTTCATAATCCTTCTTTTCTTAGTAGATGTCTGCGCTATAAAATAAGAGCAAGGCGGAAAAGGAGGTTGAGAGCAGGAGTTGTGGTTTTCAACTATAGGGACTGCTACAACATGCTTCGGAAGACAGAAGTGACTGAAGACTTTTCTTGTCCATTTTGTTTGGTGCAGTGTGCAAGCTTTAAGGGTTTGCGGTTTCATCTTTGCTCATCACATGATCTATTCAATTTTGAATTCTGGGTGACTGAAGATTACCAAGCAGTGAATGTCTCTGTAAAAATTGATATATCGAGATCGGAGAACGTTACCGATGGAGAAAATCCAAAATCAGAAACCTTCTTCTTCTGGTTGGTTAATTCGAGACCTCGAAAACGTAAGCGAGAGGATTCTACACAAAATGAAAAGCGTGCCAGTGTAAAGTTCCTGGAGTTGGATTCACCAGAAGGCACACACACCGGTTTTGTAGAGAAGAATGATGATATCCTCTCCTACAAAGGGGAGAATATGTCTGGAACATCTTCTATTCAGAAGAATTTGCAGAATGGAGGAAAATTTGATCCTGATCATCCTGGCACCATGGACTACCTGGAGCATGTCTCGTCCAGTTTCAACATTCCAGGTGTTCCAATTGCCATGCCCCTGTCTTCTGGGGATCCTGAATGTAGTAAATCAGTACATAGAAGTGATCCTGCTGTGCCTGTTAAAACGAAGAAGTTAAACATGGATCGATCAGACTCAAAAAAGTATGACCGAATGCTCCTGCAGAAGAGACAGTTCTTTCACTCACACCGAGTTCAGCCGATGGCACTAGAACAAGTATTATCAGATCGTGATAGTGAAGATGAAGTTGATGATGACATTGCAGATCTTGAAGATCGAAGGATGCTTGATGATTTTGTGGATGTTTACAAAGATGAGAAACAGGTCATGCATCTCTGGAACTCTTTTATGAGGAAACAAAGGGTTCTGGCTGATGGTCATGTTCCATGGGCCTGTGAGGCATTTTCCAAGCTTCATCGAAAAGAGCTCATCTCATCTCCAGCTTTATTTTGGTGTTGGAGGTTATTTATGATCAAACTTTGGAACCATGGTCTTCTTGATGCCTGCACAATGAACAACTGTAGTATAATACTAGATAGTCAGAAGAACGAGGGATCAGATACTGGCAAAAACTGA 1284 0.4174 MCRQNSHRSGDEEIEADESLLIYCKPVELYNILYRRALHNPSFLSRCLRYKIRARRKRRLRAGVVVFNYRDCYNMLRKTEVTEDFSCPFCLVQCASFKGLRFHLCSSHDLFNFEFWVTEDYQAVNVSVKIDISRSENVTDGENPKSETFFFWLVNSRPRKRKREDSTQNEKRASVKFLELDSPEGTHTGFVEKNDDILSYKGENMSGTSSIQKNLQNGGKFDPDHPGTMDYLEHVSSSFNIPGVPIAMPLSSGDPECSKSVHRSDPAVPVKTKKLNMDRSDSKKYDRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVYKDEKQVMHLWNSFMRKQRVLADGHVPWACEAFSKLHRKELISSPALFWCWRLFMIKLWNHGLLDACTMNNCSIILDSQKNEGSDTGKN* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0410 427 Pfam VEFS-Box of polycomb protein 277 412 IPR019135 -
Lan17g0410 427 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 1 60 - -
Lan17g0410 427 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 58 426 - -
Lan17g0410 427 PANTHER POLYCOMB GROUP PROTEIN 58 426 - -
Lan17g0410 427 PANTHER POLYCOMB GROUP PROTEIN 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0410 Lan-Chr17 3034047 3042155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0410 20 66 C2H2 Transcription Factor Family AT5G51230 61.702 3.78e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0410 - - gmx:100807112 673.315