Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0403 ATGGATTCAAATCCTGGAAACAATCTCTTCGTTTGCGAGGTTAAGGCTGAATACATCTACCCTCTTCAGACCCCACTAAGTGGGAGCCTCATTTACTGGCCCACCCTTTTTAAAGTTTTTAATTTGTTATTTGTTTCCTTGGATGCTTTCATGTCTGCAGAGCAGAAAGTAAAGTGCAGAACATCAGTTGGCAAAGCTTTTCTCTATCATTCAAGAGGAATGACAGCATCACTCAATATTGCTCTTTCTGAAGAAAGATTTGGGAAGCGATCAATTGAAAATGGGGATTGCACTTCTCTTACTCGATCCATGTATAAGCGGCGTAAACTGTCTGCAAATCGTGATTTTCCAGAGGGATGTGGACCATTAGCTTCAAATGTTGATCCAGTGTCAAAGGTAGATGTCACTGATTTTGTTTCAGCTAATGGTACAAATGTTGAGGATAAGAATGAGCAACATTCAGGGGATGCTACTGTTAGAATTTCCAAGTGTGAAGATGATTCTCAGCATTCCGTGTTAAAAAAGGATTCAATTCTTACCGAGTCCCTTCGCCAAACAACTGACTGTAGTTTGAAGAATAAAAATCCAGAGGTTGCATCTCATTATGCAGATGGGCTTCCTTTGGCAAATGATGTGTCGACAAAAGTGGCATCGGTGGGTGCAGAAGCTATGGAGGATACAGGGTTGACCCTTGGCCAAATAACTGACTGTAATCTGAAGAATGAGAATCCAGTTCGCCAAACAGCTGACCATAGTTTGAAAAATGAAGATCCAGTAGTTGCTTCTCATCACGTGAATGGTCTTCCTTTGGCAAATGATGATCCTGCAAAAGTGTTGGTTGGCGTGGATGCTCTGGAGGATACAGGGCTGACTGGAGTTGCGAACTCTGTAAAATGTATGTCCTCTATGCCAAAGTCACCCTCTCCAGTGGATGGGGTGGCTTTGTCAGGTGGTTCAAAGTCCTGTTGCAATGGCAATGTATCTGGTTCCAGTGATTGTATTAAGAAGGCTATGACTACAAGGTATGCTCCTCTAAGAAAACTTTCAGCTGTCAGAGATTTCCCCCCTTTATGTGGGCGCAATGCTCCACGTCTCGGCAAGGATGAGCATCTAAATAAGATATCTTTGGATAGCAAGATACCGGATCAGCAGAACTTGGCTGTAGATGACAATCCATTGAAAAAAATAACAGCCACTGATGTGCAGGAGAAGGACAATAACATTCAAGAGGAAAATGCATGCAAGAGAAAGCTTGTGGATGTAGGTAAAGCTGATTCTGAAAGTAGTGCCACAAAGAAAGTGAAGAAGATGGATGCATTTGAACATCCTCAAGAAAGTAATCAAGTTGTAATAAATTTCGAGACAGCTATAGAAGAGGAAAATCAGGATGCTGTACAGGATGAGGGAGCATCAGGGCTAGCGATTATAGCTTGCCCAGAAGTCCAAAGTCCTGAGGCAAAGCCTTTAGATATGTCTACTTGTCAGCATGAGTTGAAAGGAGATTTCAGTGGATTGCAGGTTTCATCAAATAGGAAAGTGGTGCTAGGTTTGATGTCTAAACCAGAATGTCTTTGGAGATCTGATAAAGATTCTTCCATATCTAAAACGTTTGGTGATAAAAATGGAAGCAAGGCAAAGAAAGGTGGTTTCTCTGCACACCTTGACAGGTCTAAAGCTACTTTGAAGTGTAAAGATGCACCAAATCAGTCTGGGCAGAAGCCATTGAAAAAGAAAAAAGAAAATGCTGCTTCTGATGATATGGGTCAATTAGTAGTGTTTGAAAAGGATTCTCTTGACCTCAATGAAAACATCGAAGACTTTCAGGTTGTCCCTAAATCACATGGTTTCAATGTAAATGTTCCTCCTTTTGGTCATGGTAATTTTGGTGGTCATGAGAATGACTCGACTGTGACCCGAAATAAAGTCAGGGAAACATTACGCCTGTTTCAAGTTGTTTCTAGAAAGATTTTGCAGCAAGTAGAAGGTAATTCGAAAGGGCGAGCAAATAATTCCAAGAGGGTTGATTTACAAGCGTCCAAGATCCTTAAGGAGAAAGGGAAATATGTTAACACAGGCAAGCAAATATTGGGATCTGTCCCTGGGGTTGAAGTTGGTGATGAATTTCAGTATAGGGTGGAGCTTAATATGATTGGCCTTCATCGCCAGAGTCAGAGTGGTATAGATTATTTGAAGCACAATGGTAAGATCCTTGCGACTAGTATTGTTGCATCAGGGGGCTATGCTGATGATCTGGATAATTCGAATGTCTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCTCTGATAAAGAACCTGAAGATCAGAAGCTTGAGCGGGGCAATCTTGCTTTGAAGAACAGTAGTGAGGAAAAGAATCCTGTTAGGGTGATACGTGGCTATGGATCAATGGACGGAAGGCCCAAGACATTGGTTTATGATGGACTATATCTGGTTGAGTCGTATTGGCAGGATATGGGGCCACATGGGAAGCTGGTTTATAAGTTTCGTCTGCGAAGAATCCCAGGTCAACCTGAGCTTGCTTTGAAGGAAGTGAAGAAATCTAAAAAGTTCAAAACAAGGGAAGGTCTATGTGTTGATGATATTTCTCATGGGAAAGAGCGGATTCCAGTATGTGCTGTGAACACTGTAGATGATGAGAAACCCCCATCATTTAAATACATAACTAGCATGATATATCCTGATGGCAATCTCACTCGTCATGAAGGATGTGATTGTACTAATGGATGCTCTGACTCGAATAAATGTTCTTGTGTAGTAGAAAATGGGGGAGAGATCCCATTCAATCATAATGGCGCTATTGTAGAAGCAAAGCCTCTAGTCTATGAGTGTGGACCATCTTGCAAGTGCCCTTCAACATGCCATAATAGAGTCAGCCAACTCGGCATAAAGTTTCAACTTGAAATATTTAAAACCAGTACGAGGGGATGGGGTGTGAGATCCCTAAATTCCATTCCTTCAGGAAGTTTTATCTGTGAGTACATAGGAGAACTTCTCGAAGACAAGGAAGCTGAACAAAGAACTAGTAATGATGAGTATCTTTTTGATATTGGAAACAACTTCACCAACAGTACTCTCTGGGATGGACTTTCCACACTTATGCCTGATGCACAGTCAAGTTCTCTCGAAGTTGTGAAGGATGGTGGCTTCACGATTGATGCTGCCGAGTATGGTAATGTGGGGAGATTCATCAACCATAGTTGCTCCCCTAATCTTTATGCCCAGAATGTCCTTTATGATCATGATGACAAGGGTATGCCTCATATAATGCTTTTTGCTGCTGAGAACATTCCTCCACTGCAAGAGCTGACTTACGATTACAATTACAAGATTGATCAAGTCTTTGATTCTGATGGCAATATAAAAAGGAAAGATTGCTATTGTGGCTCTGTTGAATGTACTGGTAGGATGTATTGA 3438 0.4154 MDSNPGNNLFVCEVKAEYIYPLQTPLSGSLIYWPTLFKVFNLLFVSLDAFMSAEQKVKCRTSVGKAFLYHSRGMTASLNIALSEERFGKRSIENGDCTSLTRSMYKRRKLSANRDFPEGCGPLASNVDPVSKVDVTDFVSANGTNVEDKNEQHSGDATVRISKCEDDSQHSVLKKDSILTESLRQTTDCSLKNKNPEVASHYADGLPLANDVSTKVASVGAEAMEDTGLTLGQITDCNLKNENPVRQTADHSLKNEDPVVASHHVNGLPLANDDPAKVLVGVDALEDTGLTGVANSVKCMSSMPKSPSPVDGVALSGGSKSCCNGNVSGSSDCIKKAMTTRYAPLRKLSAVRDFPPLCGRNAPRLGKDEHLNKISLDSKIPDQQNLAVDDNPLKKITATDVQEKDNNIQEENACKRKLVDVGKADSESSATKKVKKMDAFEHPQESNQVVINFETAIEEENQDAVQDEGASGLAIIACPEVQSPEAKPLDMSTCQHELKGDFSGLQVSSNRKVVLGLMSKPECLWRSDKDSSISKTFGDKNGSKAKKGGFSAHLDRSKATLKCKDAPNQSGQKPLKKKKENAASDDMGQLVVFEKDSLDLNENIEDFQVVPKSHGFNVNVPPFGHGNFGGHENDSTVTRNKVRETLRLFQVVSRKILQQVEGNSKGRANNSKRVDLQASKILKEKGKYVNTGKQILGSVPGVEVGDEFQYRVELNMIGLHRQSQSGIDYLKHNGKILATSIVASGGYADDLDNSNVLIYTGQGGNVMSSDKEPEDQKLERGNLALKNSSEEKNPVRVIRGYGSMDGRPKTLVYDGLYLVESYWQDMGPHGKLVYKFRLRRIPGQPELALKEVKKSKKFKTREGLCVDDISHGKERIPVCAVNTVDDEKPPSFKYITSMIYPDGNLTRHEGCDCTNGCSDSNKCSCVVENGGEIPFNHNGAIVEAKPLVYECGPSCKCPSTCHNRVSQLGIKFQLEIFKTSTRGWGVRSLNSIPSGSFICEYIGELLEDKEAEQRTSNDEYLFDIGNNFTNSTLWDGLSTLMPDAQSSSLEVVKDGGFTIDAAEYGNVGRFINHSCSPNLYAQNVLYDHDDKGMPHIMLFAAENIPPLQELTYDYNYKIDQVFDSDGNIKRKDCYCGSVECTGRMY* 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0403 1145 ProSiteProfiles YDG domain profile. 697 840 IPR003105 -
Lan17g0403 1145 SUPERFAMILY SET domain 856 1122 IPR046341 -
Lan17g0403 1145 SMART G9a_1 692 844 IPR003105 -
Lan17g0403 1145 MobiDBLite consensus disorder prediction 530 583 - -
Lan17g0403 1145 ProSiteProfiles Pre-SET domain profile. 909 969 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan17g0403 1145 ProSiteProfiles SET domain profile. 972 1115 IPR001214 GO:0005515
Lan17g0403 1145 SUPERFAMILY PUA domain-like 678 853 IPR015947 -
Lan17g0403 1145 Pfam SAD/SRA domain 696 844 IPR003105 -
Lan17g0403 1145 CDD SET_AtSUVH-like 890 1116 - -
Lan17g0403 1145 Pfam SET domain 983 1115 IPR001214 GO:0005515
Lan17g0403 1145 ProSiteProfiles Post-SET domain profile. 1129 1145 IPR003616 -
Lan17g0403 1145 SMART set_7 972 1121 IPR001214 GO:0005515
Lan17g0403 1145 SMART PostSET_3 1129 1145 IPR003616 -
Lan17g0403 1145 Pfam Pre-SET motif 869 964 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lan17g0403 1145 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 516 1145 IPR025794 GO:0016571
Lan17g0403 1145 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 578 1144 - -
Lan17g0403 1145 Gene3D - 679 860 IPR036987 -
Lan17g0403 1145 Gene3D SET domain 861 1145 IPR046341 -
Lan17g0403 1145 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 578 1144 - -
Lan17g0403 1145 SMART preset_2 866 956 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0403 Lan-Chr17 2988343 2994387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0403 639 1142 Su(var)3-9 homologs AT5G04940 41.426 8.55e-118 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan17g0403 SAD_SRA 2.4e-51 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0403 K11420 - gmx:100803378 1285.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0403 17 2988343 2994387 Lan18g0925 18 14500158 14507064 LSH
Lan17g0403 17 2988343 2994387 Lan6g0324 6 2503832 2508120 LSH