Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0399 ATGAAATCACTGAGCTTGACCCCTTTGAATTTATTTTCTCAACAAGTTTCTGATCTTCCAAACATGGGAAATTCCAGTGTAATTAAGTCTGATCCTAGAAGTGCACAAATGACAATCTTTTATGGTGGGGAAGTTATTGTTTTTGATGATTGTTCAGCTGAGAAAGCCAAGGAGATTGTGTCCTTTGTCAACAAAGGAAAGTCCCAAATTCAGAACAACAATAACTTCCCTTATACATTTCCTTTTGATATGAATGTCATTCCTGATAATAGCAACAATTTGGTTCAAGAGCACCACACTCAAGCACCATCTAGACCTGTTTCTTGTGGTCTACCACTTACTAGGAAAGCCTCACTGTATCGATTTTTGGAGAAGAGAAAGGATAGAATTGCTGCTAGAACACCATATCAAACAAGCAATCCTACAATAGCTCCTTATAAGCCAGCTGAATCCATGTCATGGCTGGCCTTGTCACCTCATTCCCCACAAGACAGATCTGAGAGTTGCTCCAATTTTGTATAG 522 0.3908 MKSLSLTPLNLFSQQVSDLPNMGNSSVIKSDPRSAQMTIFYGGEVIVFDDCSAEKAKEIVSFVNKGKSQIQNNNNFPYTFPFDMNVIPDNSNNLVQEHHTQAPSRPVSCGLPLTRKASLYRFLEKRKDRIAARTPYQTSNPTIAPYKPAESMSWLALSPHSPQDRSESCSNFV* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0399 173 Pfam tify domain 32 62 IPR010399 -
Lan17g0399 173 SMART tify_2 30 65 IPR010399 -
Lan17g0399 173 ProSiteProfiles Tify domain profile. 30 65 IPR010399 -
Lan17g0399 173 Pfam Jas motif 112 137 IPR018467 -
Lan17g0399 173 PANTHER PROTEIN TIFY 10A 7 158 - -
Lan17g0399 173 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 7 158 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0399 Lan-Chr17 2960501 2961724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0399 28 158 Tify Gene Family AT1G19180 40.741 2.28e-26 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lan17g0399 tify 1.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0399 K13464 - gmx:100306332 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0399 17 2960501 2961724 Lan6g0322 6 2495558 2496836 LSH