Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0397 ATGGAAGAACGGTATGAGATAATAAGAGAAATTGGTTATGGTAATTTCGCAGTGACAAAGTTGGCAAAAGATAATAACACAGGGCACCTTGTTGCTATCAAATTCATTCTAAGGGGAGAAAAGATTGATAAGAATGTTCAAAGAGAGATAATTAATCACCGATCTTTAAGGCATCAAAATATTATCAGGTTCAAAGATGTATTTCTAACCACTACTCATTTAGCTCTTGTCCTGGAATATGCTGGTGGTGGTGAACTCTTTGATAGGATATGTAACAATGGTCCATTCACTGAAGATCTGGCAAGATTTTTCTTCCAGCAACTAATATCCGGAGTTGGTTACTGTCATTCCATGCAAATTTGTCACAGAGATCTCAAAATGGAAAACATTCTCTTGGATGGAAATCCAGTTCCTCTACTCAAAATTTGTGACTTTGGTTTCTCCAAGTCTAATTTACTTCACTCTAGACCAAAATCAACAGTTGGAACTCCTACATATGTTGCTCCTGAAGTTTTTTTTCGCCAGGAGTATGATGGAAAGGCTGTTGATGTTTGGTCATGTGGTGTGATTCTTTACACCATGTTAGTTGGAGCATACCCATTTGAAGATCCAGAAAATCCTAAAGATATCAGAAAGACGGTTCAAAGAATAATGAATGTTCAGTTCTCCATACCCAAAGATGTACATCTTTCTACAGAGTGTAAAAATCTCCTCTCACTTATTTTTGTTGCTGATCCTGTTAAGAGGATCAAAATATCAGGGATAAAACAGCACCCTTGGTTTGTGAAGAAATGGCATAAACAGATAATTGATATTAATAATAAAGCTTCCGAGGCAACAAAGAAATACCAACTATGCCGAAGTGTTGGAGAAATCATGCGGATCATACAAGAGGCAAAAACACCATCCAAAGCTTTCACAGAGTCATATGATGCTCAGGATCGACGCGGAAATTGA 957 0.372 MEERYEIIREIGYGNFAVTKLAKDNNTGHLVAIKFILRGEKIDKNVQREIINHRSLRHQNIIRFKDVFLTTTHLALVLEYAGGGELFDRICNNGPFTEDLARFFFQQLISGVGYCHSMQICHRDLKMENILLDGNPVPLLKICDFGFSKSNLLHSRPKSTVGTPTYVAPEVFFRQEYDGKAVDVWSCGVILYTMLVGAYPFEDPENPKDIRKTVQRIMNVQFSIPKDVHLSTECKNLLSLIFVADPVKRIKISGIKQHPWFVKKWHKQIIDINNKASEATKKYQLCRSVGEIMRIIQEAKTPSKAFTESYDAQDRRGN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0397 318 Gene3D Transferase(Phosphotransferase) domain 1 82 267 - -
Lan17g0397 318 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0397 318 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0397 318 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 304 - -
Lan17g0397 318 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0397 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Lan17g0397 318 SUPERFAMILY Protein kinase-like (PK-like) 3 267 IPR011009 -
Lan17g0397 318 PANTHER SERINE/THREONINE KINASE 3 304 - -
Lan17g0397 318 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Lan17g0397 318 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0397 Lan-Chr17 2949806 2952750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0397 4 261 CBL-interacting serine-threonine protein kinases AT5G35410 43.657 3.75e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lan17g0397 Pkinase 1.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0397 K14498 - gmx:547790 435.647