Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0393 ATGACCAAGAGGACGAAGAAGGCTGGCATTGTTGGCAAATATGGTACCCGTTATGGTGCTAGTCTACGGAAGCAGATTAAGAAGATGGAAGTTAGTCAACATAGCAAATTTTTCTGTGAATTTTGTGGAAAGTATGCTGTGAAGAGGAAGGCTGTAGGGATATGGGGATGCAAGGATTGCGGTAAAGTGAAAGCTGGAGGCGCCTATACTTTGAATACTGCAAGTGCTGTGACTGTGCGGAGCACCATTCGTAGGTTGAGGGAACAAACTGAGGGTTGA 279 0.4552 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0393 92 Pfam Ribosomal L37ae protein family 4 88 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lan17g0393 92 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 4 72 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lan17g0393 92 TIGRFAM eL43_euk_arch: ribosomal protein eL43 1 91 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lan17g0393 92 PANTHER ZGC:171772 1 92 - -
Lan17g0393 92 SUPERFAMILY Zn-binding ribosomal proteins 10 82 IPR011332 GO:0006412
Lan17g0393 92 Gene3D - 1 92 IPR011331 GO:0003735|GO:0005840|GO:0006412
Lan17g0393 92 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0393 Lan-Chr17 2927137 2928649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0393 1 91 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 93.407 4.19e-59 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0393 K02921 - gmx:100499850 190.274