Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0377 ATGGACCAACACAAGAGACTCTTATTGATCTTAATTACTATTCTGTTCAATACTTCAACTCTGAGAGGTGATGAACTTGTTCAGCTTGTTCATGACTACTACAAGGAGAAGTGTCCCTTAGCTGAAGACATCGTGAGACATAACGTAGAGGTAGCACTTTACAAAGATCCTGGTTTGGCGGCCTCGCTACTTCGCTTACACTTTCACGACTGCTTTGTCATGAGAGGGGGACCAGGATGGGATGTGTGGCTGGGGAGGAAAGACTCCCTCATGTCAAGCTTCAGTGGAGCTAACCAGTTCATTCCTGCACCAAATTCCTCCTTAGAGGTTCTCATTGACAACTTTAAGCAACATGGCCTAGAAATAGAAGACATGGTCGCACTATCCGGTAGCCATACCATTGGAAGAGCAAGATGTCTAAGCTTCAGACAGCGGATCTATGAACCGAAACAAGAATATCACTATGGCTATGATCGCTACAAGAGATACACAACCTTCAGAAGAATCCTACAGTCCATATGCCCTGTTAGTGGAAGGGATAACAAGTTTGCACCATTGGATTTTGAAACCCCAAAGAGGTTTGATAACCACTACTTTATAAACATACTGGAAGGAAAGGGATTGTTAGGTTCTGATAATGTATTGACCAGCCAGGATTTTGATGGAACAATCACAAAACAGGTGTGGGCTTATGCCTCCAATCAAAAAGTTTTCTTTGCTTCATTTGCTAAATCTATGATTAAGATGGGAAATATTAATGTACTAACAGGAAATGAAGGAGAAATTAGGAGGAATTGTAGGTTTGTCAACGCCTGA 816 0.4191 MDQHKRLLLILITILFNTSTLRGDELVQLVHDYYKEKCPLAEDIVRHNVEVALYKDPGLAASLLRLHFHDCFVMRGGPGWDVWLGRKDSLMSSFSGANQFIPAPNSSLEVLIDNFKQHGLEIEDMVALSGSHTIGRARCLSFRQRIYEPKQEYHYGYDRYKRYTTFRRILQSICPVSGRDNKFAPLDFETPKRFDNHYFINILEGKGLLGSDNVLTSQDFDGTITKQVWAYASNQKVFFASFAKSMIKMGNINVLTGNEGEIRRNCRFVNA* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0377 271 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Lan17g0377 271 SUPERFAMILY Heme-dependent peroxidases 28 270 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan17g0377 271 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan17g0377 271 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan17g0377 271 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan17g0377 271 Gene3D Peroxidase, domain 2 102 249 - -
Lan17g0377 271 Gene3D - 29 74 - -
Lan17g0377 271 Pfam Peroxidase 75 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan17g0377 271 ProSitePatterns Peroxidases proximal heme-ligand signature. 124 134 IPR019793 -
Lan17g0377 271 PANTHER PEROXIDASE 20 6 73 - -
Lan17g0377 271 PANTHER PEROXIDASE 20 74 270 - -
Lan17g0377 271 CDD secretory_peroxidase 28 269 IPR033905 GO:0004601|GO:0042744
Lan17g0377 271 ProSiteProfiles Plant heme peroxidase family profile. 61 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan17g0377 271 Gene3D - 75 270 - -
Lan17g0377 271 PANTHER PEROXIDASE 72-RELATED 6 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan17g0377 271 PANTHER PEROXIDASE 72-RELATED 74 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan17g0377 271 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan17g0377 271 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0377 Lan-Chr17 2805760 2813722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0377 17 270 Peroxidase AT2G35380 55.118 1.30e-100 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0377 K00430 - fve:101313615 381.333