Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan17g0374 | ATGGGTTGCACGGTGAGGGAAAAACACATCCAAGCCAATCGCAAATCTCGATCGCAGAAACCCAATTGCAATGCTAATTCTCGCTCTAAGTCCATGATGAACCACGTGGATGTGACTCCCAAACAATCTTCTTCAAATTCAAATCCAAATCCTAATCCTAACGATGCTTCATCTGGGTGGGGTTTATGCACCGAGGATCAATTGGAACATATTTTATTGAAAAAAATGGAAATTATATACAATGATGCTGTCTCAAAGCTTGTTGCTTTAGGGTACGAGGAGGATGTAGCCCTAAGAGCGATATTGCAAAATGGTCATTATCACGGTCCAATGGATGTGTTAACAAACATTTTGCACAACACATTGGGTTATTTGAGTAATGATGAATCTGACTCCGAGTCTGAGTCTGAGTCGGAGACTGTGTTCACTGACTTGAAGCAGTTAGTGCGGTATTCGCTAGCTGGTATGGTATCTTTGTTGCAACAATTGAGGCCCAATTTGTGTAAAGGTGATGCCATGTGGTGTTTGCTCATCACTGATTTCCATATAGAAAAGGCAACCAACATTCAAATTCCAGTTTCCGATGACAATGCAGTTGAGACTGGTAGCGGTGATAATTTTAAGAATGTATTTGATGTTATGCCTCCACCTCTATGTAGGTTTCATGGTGGATGGGGGTTTGGAAATGGGGGAACCTCACAGATGACTTTACAGTTACAAAGAGATATTGAATTCCCAAAGAGGTTTAACCTTTCTCCTCAGATGAAGTCCATGTTGAAAAGAAATGTTGCCATGTTCGCTGCTGGTTTTAGGGCCAACTCTAACCAGTTACATCCCAAAGCTGTTCCTCGCAGTAGCTTTGCATCGTCAAGTTTTGAGTCTCCATCTGAGAAGTCTGGTGACTCACACAATCTGAATAATCTAGATGCAGTGAACTCGGTGCTGTTGAGTAAGTTTCGTGATCTAAATCTTGACGAGAAACTGGATTTTGTGGCTGAAGATAAGAAGGGTGAGGTGATAGTCAATCTGTTCCGTCAGATTAAGGATCTTGAGAAACAGGTCAAGGATCGAAAAGAATGGGCTCATCAGAAGGCAATGCAAGCAGCAAGAAAGCTGAGTGGAGATCTCACCGAGCTGAAAATATTAAGGATGGAAAGAGAGGAGACCCAAAGATTGAAGAAAGGGAAGCAGACACTTGAGGGTACAACCATGAAAAGACTCTCAGAGATGGAGAATAACCTGAAAAAGGCTAGTGGTCAAGTGGACCATGCAAATGCTTCTGTCAGAAAACTAGAGATAGAGAATGCAGAAATCAAAGCAGAGATGGAGGCTTCTAAATTAAGTGCATCAGAGTCAGTCATGGCATGCCTGCAAATTGCAAAAAGGGAGAAAAATTACTTAAAGAAGCTTCTAGCGTGTGAAAAACAGAAAGCTAAGCTGCAGCAGGAGATTTCTGATGGAAAACAGAAGATATTGGAGATACAAGAAGAATTGGCTCAGATTAAGAAGTGTAAAAAAGAAGCCAAGGTCAAGTTAGGGGAGGAGTTAAAGGCTAAGGAGGAAGCGTTAGCACTAATTGAGGAGGAACGTCATGCTAAGGAAGTAGCTGAGGCTAATCATAAGAGAAATCTTAAAGCTTTACAACTGAACATAGAGATAGATTTCCAGCGCCGCAAGGATGATATCTTAAGGCTTGAGCAGGAGCTGGCACGTCTTAAAGCATCTGCTCATTCTGATAAGCTGCATCATAAATCAAATACTTCACGTGCAGGTGAATCTGAGGGTGCAAAGCTGCCAAGAGAGACAATTGCTATGCTTCTTCAGGACTTGGATAATCTGGAGGATTTTTCAGAAAAAGAAGTCAGCAGTGATAGACAGTGCATTATATGCAACAAAGATGAAGTTTCAATTGTCTTCTTGCCGTGTGCACACCAAGTTATGTGTGCTAGTTGCAGTGAAGAGTATGGGAGAAAGGGCAGAGCTGCTTGTCCATGCTGCTGGGTTCCAATCGAACAGAGAATCCGTGTCTTTGGGGCAAGTTCGTAG | 2046 | 0.4223 | MGCTVREKHIQANRKSRSQKPNCNANSRSKSMMNHVDVTPKQSSSNSNPNPNPNDASSGWGLCTEDQLEHILLKKMEIIYNDAVSKLVALGYEEDVALRAILQNGHYHGPMDVLTNILHNTLGYLSNDESDSESESESETVFTDLKQLVRYSLAGMVSLLQQLRPNLCKGDAMWCLLITDFHIEKATNIQIPVSDDNAVETGSGDNFKNVFDVMPPPLCRFHGGWGFGNGGTSQMTLQLQRDIEFPKRFNLSPQMKSMLKRNVAMFAAGFRANSNQLHPKAVPRSSFASSSFESPSEKSGDSHNLNNLDAVNSVLLSKFRDLNLDEKLDFVAEDKKGEVIVNLFRQIKDLEKQVKDRKEWAHQKAMQAARKLSGDLTELKILRMEREETQRLKKGKQTLEGTTMKRLSEMENNLKKASGQVDHANASVRKLEIENAEIKAEMEASKLSASESVMACLQIAKREKNYLKKLLACEKQKAKLQQEISDGKQKILEIQEELAQIKKCKKEAKVKLGEELKAKEEALALIEEERHAKEVAEANHKRNLKALQLNIEIDFQRRKDDILRLEQELARLKASAHSDKLHHKSNTSRAGESEGAKLPRETIAMLLQDLDNLEDFSEKEVSSDRQCIICNKDEVSIVFLPCAHQVMCASCSEEYGRKGRAACPCCWVPIEQRIRVFGASS* | 682 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan17g0374 | 681 | MobiDBLite | consensus disorder prediction | 286 | 305 | - | - | |
Lan17g0374 | 681 | MobiDBLite | consensus disorder prediction | 576 | 595 | - | - | |
Lan17g0374 | 681 | Pfam | Family of unknown function (DUF6592) | 75 | 187 | IPR046527 | - | |
Lan17g0374 | 681 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
Lan17g0374 | 681 | Coils | Coil | 407 | 448 | - | - | |
Lan17g0374 | 681 | Pfam | Zinc finger, C3HC4 type (RING finger) | 624 | 672 | - | - | |
Lan17g0374 | 681 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 613 | 678 | IPR013083 | - | |
Lan17g0374 | 681 | ProSiteProfiles | Zinc finger RING-type profile. | 627 | 666 | IPR001841 | - | |
Lan17g0374 | 681 | MobiDBLite | consensus disorder prediction | 16 | 60 | - | - | |
Lan17g0374 | 681 | Coils | Coil | 463 | 539 | - | - | |
Lan17g0374 | 681 | Coils | Coil | 555 | 575 | - | - | |
Lan17g0374 | 681 | PANTHER | OS05G0141500 PROTEIN | 1 | 680 | IPR046934 | - | |
Lan17g0374 | 681 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 680 | - | - | |
Lan17g0374 | 681 | SUPERFAMILY | RING/U-box | 603 | 673 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan17g0374 | Lan-Chr17 | 2772338 | 2775942 | Dispersed/Wgd |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan17g0374 | - | - | gmx:100777787 | 838.18 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lan17g0374 | 17 | 2772338 | 2775942 | Lan6g0304 | 6 | 2326492 | 2330108 | LSH | |
Lan17g0374 | 17 | 2772338 | 2775942 | Lan17g0990 | 17 | 14021724 | 14034097 | PCT | |
Lan17g0990 | 17 | 14021724 | 14034097 | Lan17g0374 | 17 | 2772338 | 2775942 | PCT |