Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0359 ATGCTCTCTGCTCTTTCACCTAACCATTCTTTCCTCTCAAACCCATTCTCCACGGTGTTCCACGGCGGTTTCACGCCGTGGAACTGCCATGACCTTTTGCTAACCAAACCCACAGGCCCGAAGCCAGTTACTTCAAGTATCGGCTCTGATGACACCGACCAAACCCATGCAAAAGAAAAACCAGGCTCAGACGACTCGAACCGTGGCGTCACAATTGTGGAAGAGCGTAAGCGGAGGCGAATGATATCGAACCGAGAATCGGCCCGGAGGTCACGCATGCGTAAACAGAGGCATATTGAGAACTTACGGAACCAGTTGAATCTGTTTAGGGTTGAAAACAGGGACCTGAATACTCGGTTACAGTTCTTACTGAACCACTATAACTGCGTACAAACCGAAAATAATTGGCTCCGGTCTCACCGAACCTTGCTCTGTCAAAAATTGTCCAACATAAGTCAATTTATGGTTTTCCAACAACCTCAACCCTTGATCTCTGCATGGCCATGCAATAATCTCACAGCGGAATAA 528 0.4773 MLSALSPNHSFLSNPFSTVFHGGFTPWNCHDLLLTKPTGPKPVTSSIGSDDTDQTHAKEKPGSDDSNRGVTIVEERKRRRMISNRESARRSRMRKQRHIENLRNQLNLFRVENRDLNTRLQFLLNHYNCVQTENNWLRSHRTLLCQKLSNISQFMVFQQPQPLISAWPCNNLTAE* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0359 175 SMART brlzneu 72 136 IPR004827 GO:0003700|GO:0006355
Lan17g0359 175 CDD bZIP_plant_GBF1 77 128 IPR045314 GO:0003700|GO:0006355
Lan17g0359 175 SUPERFAMILY Leucine zipper domain 76 127 IPR046347 GO:0003700|GO:0006355
Lan17g0359 175 MobiDBLite consensus disorder prediction 40 69 - -
Lan17g0359 175 PANTHER BZIP TRANSCRIPTION FACTOR 44 26 175 - -
Lan17g0359 175 MobiDBLite consensus disorder prediction 76 95 - -
Lan17g0359 175 Pfam bZIP transcription factor 76 131 IPR004827 GO:0003700|GO:0006355
Lan17g0359 175 Gene3D - 74 153 - -
Lan17g0359 175 MobiDBLite consensus disorder prediction 52 69 - -
Lan17g0359 175 PANTHER BZIP TRANSCRIPTION FACTOR 26 175 - -
Lan17g0359 175 Coils Coil 85 119 - -
Lan17g0359 175 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 79 94 IPR004827 GO:0003700|GO:0006355
Lan17g0359 175 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 74 123 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0359 Lan-Chr17 2618279 2619096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0359 20 161 bZIP Transcription Factor Family AT2G22850 35.233 9.51e-26 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan17g0359 bZIP_1 2.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0359 - - lang:109332688 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0359 17 2618279 2619096 Lan18g0965 18 14813316 14814230 LSH
Lan17g0359 17 2618279 2619096 Lan6g0285 6 2159769 2160686 LSH
Lan17g0359 17 2618279 2619096 Lan6g1465 6 21438643 21463106 PCT
Lan6g1465 6 21438643 21463106 Lan17g0359 17 2618279 2619096 PCT