Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0354 ATGGCTGCTACTAGTTCAAACCCACCAGTGTCTCTACAAACCCAAGAAAAAACTTGGCTTTCACGTATACCCAGTTCTCACAAGCTCTTAAATTATGGTACAAGATTGAAAAATAGAAGGCTCGGTTGTGGTTGTGGTTTCAGGTTAGAAGGAAGTAGAAAGAGAGAGTTTTTTGTGAGAGGGTGTTGGTGTGGCCCTGATGACTACGGTGTGACAGAGGAGGATCAAGAGTTTGTGAAGGTTCTTTCAGAAGCACAACCTTATATTGCTGTACATAGGGATAGAGTATTTGTTTTGGTCATTTCTGCAGAAATTGTTGCTAGTCCTTGCTTGGATCTCATTCTCAAGGATATAGCTTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGGACCCATGTGCAAATAGACAACCTTTTGAATGAGAGAGGGAGCCAGCCTAAGTATGTTGGTAGATATAGAATAACTGATGACGAATCTCTAGCTGCTGCAATGGAAGCTGCTGGGGGAATAAGATTGATGATTGAAGCAAAACTTTCTCCTGGGCCCTCTATATGCAATGTTCGTCGACATGGTGACAATAGCCGTTGGCACGAAGTCGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCTGCCAAGAAAAGAGGGGTTGTCAACGGAATTGATTTTGGGTCGACCGGGGAAGTTAAAAAAGTAGATGCATCTCGAATGCGTGAGAGGCTTGATGGTGGTTGTGTAGTTATTTTAAGCAACTTGGGCTACTCGAGCTCCGGAGAAGTATTAAATTGCAACACATATGAGGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCCGACAAGTTAATATGTATTATAGATGGCCCAATACTTGACGAGAGTGGACGCCTAATTCATTTCTTGCCTCTTCAAGAAGCAGACATGTTAATTCGTAAACGAGCTGCGCAAAGTGAAATAGCTGCTAAATATGTGAAAGCAGTTGATGAAGAAATTCTCAACTCTCTTGAGCATAACCATTTTAGTGGGATAGTCCAACCTCCACCCAATGCAAAACCTTCTACAGACTGGAATAATGTAACCTTCCACAATGGCGTTGGTTTTGACAATGGAAATGGCCTAGGGTCTGGTGAGCAAGGATTTGCTATTGGAGGTCAAGAGAGGCTAAGTCGAATGAACGGTTATCTGTCAGAATTGGCAGCTGCAGCCTTTGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGGGATGGAATGGGAACAATGGTGGCTAGTGATCTTTATGAAGGCACTCGGATGGCACAGGTAAAAGATATTTCTGGAATAAAACAAATTATGCAGCCTTTGGAGGCCTCCGGCATATTGGTTAAGAGGACTGATGAAGAGCTGCTAAAATCATTGGATAACTTTGTTGTTATGGAAAGAGAAGGTCAAATAATTGCTTGTGCTGCACTTTTTCCTTTTTTTGAGGAGAAGTGTGGAGAGGTTGCTGCCATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGAGACAAGTTGCTCGATTATATGGAGAAGAAAGCATCAACTCTACGATTAAATATGCTTTTCCTGCTTACTACTCGCACAGCAGATTGGTTTGTGAGGCGTGGCTTTTCAGAATGTTCAATAGATTGTATTCCTGAGAAAAGGAGGAGAATGATCAATCTGTCCCGCAATTCTAAATATTATATGAAGAGGCTTCTACCAAATAGAAGTGGAATTACTGTTGGTAGAAAAGTTACTTCAAATTAG 1821 0.4239 MAATSSNPPVSLQTQEKTWLSRIPSSHKLLNYGTRLKNRRLGCGCGFRLEGSRKREFFVRGCWCGPDDYGVTEEDQEFVKVLSEAQPYIAVHRDRVFVLVISAEIVASPCLDLILKDIAFLHHLGIRFVLVPGTHVQIDNLLNERGSQPKYVGRYRITDDESLAAAMEAAGGIRLMIEAKLSPGPSICNVRRHGDNSRWHEVGVSVASGNFLAAKKRGVVNGIDFGSTGEVKKVDASRMRERLDGGCVVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGRLIHFLPLQEADMLIRKRAAQSEIAAKYVKAVDEEILNSLEHNHFSGIVQPPPNAKPSTDWNNVTFHNGVGFDNGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVKDISGIKQIMQPLEASGILVKRTDEELLKSLDNFVVMEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYMEKKASTLRLNMLFLLTTRTADWFVRRGFSECSIDCIPEKRRRMINLSRNSKYYMKRLLPNRSGITVGRKVTSN* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0354 606 Gene3D - 444 590 - -
Lan17g0354 606 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 399 590 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lan17g0354 606 SUPERFAMILY Carbamate kinase-like 74 318 IPR036393 -
Lan17g0354 606 CDD AAK_NAGS-ABP 77 438 IPR033719 -
Lan17g0354 606 Hamap Amino-acid acetyltransferase [argA]. 72 590 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lan17g0354 606 SUPERFAMILY Carbamate kinase-like 392 440 IPR036393 -
Lan17g0354 606 CDD NAT_SF 485 547 - -
Lan17g0354 606 Pfam Amino acid kinase family 111 319 IPR001048 -
Lan17g0354 606 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 444 592 IPR000182 GO:0016407
Lan17g0354 606 Pfam Acetyltransferase (GNAT) family 484 547 IPR000182 GO:0016407
Lan17g0354 606 PANTHER AMINO-ACID ACETYLTRANSFERASE 72 597 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lan17g0354 606 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 447 593 IPR016181 -
Lan17g0354 606 Gene3D - 76 443 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0354 Lan-Chr17 2560166 2567711 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lan17g0354 AA_kinase 3.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0354 K14682 - gmx:100777694 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0354 17 2560166 2567711 Lan18g0970 18 14847844 14855893 LSH
Lan17g0354 17 2560166 2567711 Lan6g0273 6 2094121 2099650 LSH