Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0349 ATGGATACTTTGTTTAGACTTGTTAGTTTTCAACAACAACACCAACAACAACTACAAGCCGATAATCAATCCCTAAACTCCACCACAAGCAGAACAACAACATCTAGTAGCTCTAGATCCTCTAGACAACAACAAAACTATCACTTCCAACAAGATCAAGACGAAGAATGCTTCAACTTTTTCATGGATGATGAAGACCTTTCCTCGTCTTCTTCTAAGCACTATTATCCCTATCAACCCCACCACCCTCCTTCCACTACAACCACCACCACACCCACCATTTTCACCTCCACAACCACCCCTGATAACTTCTCCTTCTCACCGTCCCGTACTGACTTCAACTTCGAATTCTCTGGCAAGTGGGCACACGATATCCTCCTTGAAACTGCACGTGCCATTGCAGAGAAGAATAGCGCACGTGTCCAACAACTCACGTGGATGCTCAACGAGTTAAGCTCCCCTTATGGTGATACAGATCAGAAGCTTGCTTCCTATTTCCTCCAAGCTTTGTTCAGCCGCATGAACGAAGCTGGAGATAGAACTTATCGATCTTTAACTTCTGCATCGGAGAAAACATGTTCATTCGAATCAACAAGAAAAACTGTTTTGAAGTTCCAAGAAGTTAGCCCTTGGACTACCTTTGGACACGTTGCGAGCAATGGTGCAATCTTAGAAGCCTTAGAAGGGGAACCAAAGTTGCATATAGTTGATATTAGTAACACATATTGCACTCAGTGGCCTACTCTATTTGAAGCATTGGCTACTCGGAACGATGACACTCCCTTCCTCCGTTTAACAACGGTTGTTACTACCAGACCTGGTGGCTCGATCGTGGCAGTGCAAAAAGTGATGAAGGAAATAGGCACTAGGATGGAGAAATTCGCGAGGCTCATGGGCGTTCCTTTTAAATTCAACGTGATCCATCATGCTGGTGATCTCTCTACTTTGGATTTCAGCGATTTGGATATTAAGGACGATGAAGCGTTGGCGATTAACTGCGTCAACGCTTTGCATTCGATGACAGGCGTTGGTAACGCCCGTGAACTGTTGATATCTTCGTTGAGGAGGTTACAACCGAAGATAATCACGGTAGTGGAAGAAGAAGCTGATTTGGACGTTGGATTCGATGGGTTTGAGTTTGTGAAAGGTTTTCAAGAATGCTTGAGATGGTTTAGGGTTTACTTTGAAGCTTTAGATGAGAGCTTTCCGAGGACGAGCAACGAGCGTTTGATGCTTGAGCGTGCGGCGGGGAGAGCGGTGGTTGACTTGGTGGCTTGTTCTCCGGCAGACTCGGTGGAGCGACGTGAAACAGCAGCGCGGTGGTCGCAGCGTCTGCATGGAGGTGGGTTGAATACGGTGCCGTTTAGTGATGAGGTTTCCGATGATGTGAGAGCACTTTTGAGAAGGTACAAGGAAGGTTGGTCAATGACACCGTGCTCCGACGCCGGAATATTCTTGTCGTGGAAGGAACAGGCGGTGGTGTGGGCCAGTGCATGGAGACCTTGA 1506 0.4675 MDTLFRLVSFQQQHQQQLQADNQSLNSTTSRTTTSSSSRSSRQQQNYHFQQDQDEECFNFFMDDEDLSSSSSKHYYPYQPHHPPSTTTTTTPTIFTSTTTPDNFSFSPSRTDFNFEFSGKWAHDILLETARAIAEKNSARVQQLTWMLNELSSPYGDTDQKLASYFLQALFSRMNEAGDRTYRSLTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPFLRLTTVVTTRPGGSIVAVQKVMKEIGTRMEKFARLMGVPFKFNVIHHAGDLSTLDFSDLDIKDDEALAINCVNALHSMTGVGNARELLISSLRRLQPKIITVVEEEADLDVGFDGFEFVKGFQECLRWFRVYFEALDESFPRTSNERLMLERAAGRAVVDLVACSPADSVERRETAARWSQRLHGGGLNTVPFSDEVSDDVRALLRRYKEGWSMTPCSDAGIFLSWKEQAVVWASAWRP* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0349 501 MobiDBLite consensus disorder prediction 17 49 - -
Lan17g0349 501 MobiDBLite consensus disorder prediction 71 91 - -
Lan17g0349 501 Pfam GRAS domain family 124 500 IPR005202 -
Lan17g0349 501 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 500 IPR005202 -
Lan17g0349 501 ProSiteProfiles GRAS family profile. 113 500 IPR005202 -
Lan17g0349 501 PANTHER PROTEIN SHORT-ROOT 1 500 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0349 Lan-Chr17 2534072 2536163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0349 1 501 GRAS Transcription Factor Family AT4G37650 60.894 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan17g0349 GRAS 1e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0349 - - gmx:100820459 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0349 17 2534072 2536163 Lan6g0269 6 2062810 2077233 LSH