Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0344 ATGAAACCCACCTTCTTTATTATCTTCTTCACTTCCACATTGTTTCTATTCCAATTCCACTCCTCAATTTCAATTCATGAATCTCACACTAGAAGATTCCTCCACCAACCATTGTTCCCTGAAGCTTCTGTTCCACCACCGGAAACATACACTCCGCCGTCTCCTGATGGCAACATTCCATTCTTTTACGAGAATCCACCGGGCCCACCGCCACCCTCTCAATCAGTACCTTCCAACGCTTCACTCTCGAATTCGAATTCGAACCCAACAGCAACGCAACCTAACAATGGAACAAAGAAAGTTGCGATCGCGATCTCTGTTGGAATTGTCACTCTTGGAATGTTAACTGCACTCGCGTTCTTTCTTTATAAGCATAAAGCCATACACCACGTGGAAACCCAGAAACTCGTGACCCAAAACCCGAACCCGAATTCAGAGGATTCGATGGTTCCATCATCTTCTAGCATTCTATACATTGGAACCGTTGAACCGACGGTAACGGAACCAAACAGTTCGCCGTATCGGAAGCTCAATTCCGTTAAGCGATCGGAACGGTACCGTCCGAGTCCTGAGTTGCATCCACTGCCGCCGTTGAGAAAAGACGGGAATTACCCTCCGGCGGCATCTCCGTCGTCTTCTGACGAGGAAAGTCACGTCACGACTGCGTTTCATTCACCGCAGAACTCGTCGGTGAGTTACGAGGACAGTTATTACACGCCGATTTCACGTCAGAGTTCTCTCGCTAACTATAGCCCCGCCGCTGTCGCTGCTTCCACCGTGCCACCGCCACCTCCTCCGGTTCCGTTGTCGCAGAGAACTTCCTCGAAGTCCCGGGTTTCAGCTTCGTCGCCAGATGTAAGGCATATCATAATTCCATCAATAAAGCAAACTCCGCCGCCGCCGTCTCCGGCACCACTTGATAAACGAGCAATCTCCGGAACTTCCGGAAGACCAAAGTTTTCATCGCCTCCCCCAGCTTCGAATTTGACACATCTTCAATCACCAATCAACAGAGCTCCTCCGCCCCCTCCACCGCCACCGCCTCCTCCACCACTGAAGTTGAAAGAGTCTTCAGGTATTAGAGTTTCTTCATCACATGAGTCAAGAAAGGAGAACTCTTGTAGTCCAAGTAAAGGAGTAGGTAGCAGTAGCAGTAGTGTAAAAAAAGGTTCAGCTTCAGAGAATGTTGATAATAGAAAGAGTGTGAATAATGGTGTAAGGTTTTCTGAGAGTGTAGAAGAGAATGAGAAACCAAAACTGAAAGCTCTACATTGGGACAAAGTTCGTGCTACCTCAGATCATGATACTGTATGGGACCACCTCAAATCTAACTCCTTTCAGTTAAATGAGGTTATGATGGAGTCCTTGTTTGGCTGCAATGCCACAAATTCTGTACCCAAAGAACCAATCAAAAAGTCATTTTTTCCTTCCATTGATAAGGAGAACAGGGTTTTAGACCCCAAGAAATCTCAAAACATTGCTATACTAATCAGGGCACTAAATGTCACAAGAGATGAGGTGTCCGAAGCTCTTTTAGATGGGAATCCGGAAGGTTTGGGTGCTGAACTATTGGAAACCCTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAACTTAAAAACTATGATGGTGACCTAACAAAACTTGGATCTGCAGAAAGGTTTCTTAAGGCAGTGCTTGATATCCCTTTTGCATTTAAAAGAGTTGAAGCTATGCTATATAGGGCCAACTTTGATGCAGAAGTTAACCACCTTAGAAAGTCTTTCCAAACCTTAGAGGCAGCAAGTGTGGAATTAAGGAACAGCCCGTTATTCTTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTCGGCACCAATCGAGGTGATGCTAAAGCATTCAAACTGGACACACTCTTGAAGCTTGTAGATATAAAAGGAACAGATGGAAAGACTACATTGCTCCACTTTGTGGTCCAAGAGATCATCAGATCCGAAGGTGCGGATGGCGAATTAGCAAATGAGAATGTCAAGAGCCAAATGAATTCCAAATTTAATGAGGATGAGTTTAAGAAGCAAGGATTGCATGTTGTGGCTGGGCTCAGTAGAGACCTTAGTAATGTAAAAAAGGCAGCAGGAATGGACTCAGATGTCTTAAGCAGCTACCTTTCGAAGCTTGAAACGGGGCTTGATAAAGTGAGATTGGTTTTGCAATATGAGAAGCCAGATGTGCAAGGGAATTTCTTCAAGTCCACAAAACTATTTCTCAGAGATGCGGAAGATGAAATTGCTCGGATTAAGGCTGATGAGAAAAAGGCCTTATTCCTTGTGAATGAAGTTACAGAATACTTTCACGGCGATACAACAAAGGAAGAAGCTCATCCTCTCAGAATTTTTATGATTGTAAGAGACTTTCTAAATATTCTGGACCTAGTGTGCAAAGAAGTGGGAAGGATGCATGATAGAATTGTTGGTGGTTCTTCTAGATCCTTTCGGATAGCTGCAACTGCATCATTGCCTGTTCTCAACAGGTACAATGCAAGACAAGATAGAAGCTCTGATGAGGAAAGCTCATCCCCCTAG 2577 0.4463 MKPTFFIIFFTSTLFLFQFHSSISIHESHTRRFLHQPLFPEASVPPPETYTPPSPDGNIPFFYENPPGPPPPSQSVPSNASLSNSNSNPTATQPNNGTKKVAIAISVGIVTLGMLTALAFFLYKHKAIHHVETQKLVTQNPNPNSEDSMVPSSSSILYIGTVEPTVTEPNSSPYRKLNSVKRSERYRPSPELHPLPPLRKDGNYPPAASPSSSDEESHVTTAFHSPQNSSVSYEDSYYTPISRQSSLANYSPAAVAASTVPPPPPPVPLSQRTSSKSRVSASSPDVRHIIIPSIKQTPPPPSPAPLDKRAISGTSGRPKFSSPPPASNLTHLQSPINRAPPPPPPPPPPPPLKLKESSGIRVSSSHESRKENSCSPSKGVGSSSSSVKKGSASENVDNRKSVNNGVRFSESVEENEKPKLKALHWDKVRATSDHDTVWDHLKSNSFQLNEVMMESLFGCNATNSVPKEPIKKSFFPSIDKENRVLDPKKSQNIAILIRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYDGDLTKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDAEVNHLRKSFQTLEAASVELRNSPLFFKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGADGELANENVKSQMNSKFNEDEFKKQGLHVVAGLSRDLSNVKKAAGMDSDVLSSYLSKLETGLDKVRLVLQYEKPDVQGNFFKSTKLFLRDAEDEIARIKADEKKALFLVNEVTEYFHGDTTKEEAHPLRIFMIVRDFLNILDLVCKEVGRMHDRIVGGSSRSFRIAATASLPVLNRYNARQDRSSDEESSSP* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0344 858 PANTHER FORMIN-LIKE PROTEIN 22 858 - -
Lan17g0344 858 Gene3D Formin, FH2 domain 408 818 IPR042201 -
Lan17g0344 858 MobiDBLite consensus disorder prediction 77 96 - -
Lan17g0344 858 MobiDBLite consensus disorder prediction 336 354 - -
Lan17g0344 858 Pfam Formin Homology 2 Domain 413 807 IPR015425 -
Lan17g0344 858 MobiDBLite consensus disorder prediction 255 417 - -
Lan17g0344 858 SMART it6_source 410 822 IPR015425 -
Lan17g0344 858 MobiDBLite consensus disorder prediction 44 76 - -
Lan17g0344 858 MobiDBLite consensus disorder prediction 206 236 - -
Lan17g0344 858 ProSiteProfiles Formin homology-2 (FH2) domain profile. 410 833 IPR015425 -
Lan17g0344 858 MobiDBLite consensus disorder prediction 315 335 - -
Lan17g0344 858 MobiDBLite consensus disorder prediction 164 236 - -
Lan17g0344 858 MobiDBLite consensus disorder prediction 374 409 - -
Lan17g0344 858 MobiDBLite consensus disorder prediction 44 96 - -
Lan17g0344 858 SUPERFAMILY Formin homology 2 domain (FH2 domain) 341 817 - -
Lan17g0344 858 PANTHER FORMIN-RELATED 22 858 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0344 Lan-Chr17 2501240 2505746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0344 22 848 FH2 protein (formin) Gene Family AT5G67470 52.737 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0344 - - gmx:100806929 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0344 17 2501240 2505746 Lan18g0258 18 3543376 3547814 LSH
Lan17g0344 17 2501240 2505746 Lan6g0265 6 2034579 2039326 LSH
Lan17g0344 17 2501240 2505746 Lan18g0258 18 3543376 3547814 PCT
Lan18g0258 18 3543376 3547814 Lan17g0344 17 2501240 2505746 PCT