Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0330 ATGGTTTATCTCGCCGGATTCACTACCGTCGTTGGAATCGATCACCGGAGGCCAATTCCGTTGTTATCAATTATACCAAATAGCAACGTTTCGACGCCCTACACGGTCGTATTTATGTATCGGAATTGCAGAAAACATGGCTTCAGCACCGCCTCTGAATCAGTTTGGACAGATTTTCCCGCAGATAACGCTTACGCGGTCTTAGGAGTGTCTGAGAGTAGTTCATTTGCTGAGATCAAAGCTTCTTTTCGCAAATTGGCAAAAGAAACTCACCCTGACCTTGCTGAGTCAAGGAACGATTCCACCGCGTCTCGACGCTTCGTGCAAATCCTTGCCGCTTATGAGATTCTTTCAGATACTCGAAAGAGAGCCCATTATGACATGTACTTGTTGGCTCAGAAAAAACTTATGCAAAAGCAGAAACATTCGGGGCAGGGGTCGAAATTGCACATATATGAATCACACACTACATTCAAGGAGATGGAAGTTGTGGAATGGTTAGAGTGGTACAGGTTAGCTATAAATGATATTTTGTCAGAGAAGAGGGTGGTGGTTGGAACAGGATATTTTGATGTGCTTGAGAGAGATTTTTATTCAGCTATTCATGCTGCATACTATGGTCCGGACATTGATTCTTTGCCTTTGGAGTTTCTTCCTGACTGCTTTGAAGCCGAGGAAAGGTCCTCGTATGAAACTCCTGAGGTTTTGCACTTGGTTTCAGGCCGCAATCTTTTTGGAATGGTTTGCCTTGTCAATGACATTCCAGTGATATCATCTGCCACTAATGAAAAGTTAACTTTTTCCGGATCCTTCCATTCAGCCCCCTGCCAATCTGTATCGAATAATCACAGGGATGCAGAAAGGCCAGATGATTTTGGAACTCATCAAGCTCACACATCTAAACTTTCAAGTAATGTATCAGATGCATACAGAGATCTAGAGTTGCATGTCTCTGGAAGAGTGGTTGCTACAGCTTCCAGGGTCCTACCTAGATGCTATCCTGATGGGTTGGAGAAAGAAGATGCTGAAGATCACATTCGCGTGTTTCTTAATTCAGACGAAGATCCCAAACATTTCGGCAGTGGCTTTTCGAAAAGTTACTACGCAAATGGTGCAGTTGGAAGCAGCATTCATTTGGGAACCATATCTGGACTTGGGAGCAGTCCAGATGAAGGTTGTTGTTATGTCCATAATAGCAGTGGTGTAAAGACCCATGCGATTATGAAACACAGGACATTGATGGTGAAGCATATGCACTGGTATCAAGTGGGTGATGAAGTTTCAGTTTGTGAGTGTAGATGCACTAGAGCACGTTTACCACCAAGCAAATTTTGGCTATTTGAGCCTCGTTGTGGCTTCCATGACATTGGGGGTTGGTATGTTGAAACATATGGCAAAGATAAGAAGGGTCGTACAATACCATCACAGAGGTTCTGGGATGGCTTAGATTATAGGGAGCAAGCTGACAGAAGACTTCATCCAGCAATGTATATGTTTGCTCTTGCGTATCGGACACTTGATCTTGAATATGCCAAAGTAAGCAAGAAAACATTCAGGAACACTGTCGGAGCTCAAATGTTCAAAATTCTTCACTGGTGCAGGAAACTTGTTTAA 1614 0.4337 MVYLAGFTTVVGIDHRRPIPLLSIIPNSNVSTPYTVVFMYRNCRKHGFSTASESVWTDFPADNAYAVLGVSESSSFAEIKASFRKLAKETHPDLAESRNDSTASRRFVQILAAYEILSDTRKRAHYDMYLLAQKKLMQKQKHSGQGSKLHIYESHTTFKEMEVVEWLEWYRLAINDILSEKRVVVGTGYFDVLERDFYSAIHAAYYGPDIDSLPLEFLPDCFEAEERSSYETPEVLHLVSGRNLFGMVCLVNDIPVISSATNEKLTFSGSFHSAPCQSVSNNHRDAERPDDFGTHQAHTSKLSSNVSDAYRDLELHVSGRVVATASRVLPRCYPDGLEKEDAEDHIRVFLNSDEDPKHFGSGFSKSYYANGAVGSSIHLGTISGLGSSPDEGCCYVHNSSGVKTHAIMKHRTLMVKHMHWYQVGDEVSVCECRCTRARLPPSKFWLFEPRCGFHDIGGWYVETYGKDKKGRTIPSQRFWDGLDYREQADRRLHPAMYMFALAYRTLDLEYAKVSKKTFRNTVGAQMFKILHWCRKLV* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0330 537 CDD DnaJ 63 119 IPR001623 -
Lan17g0330 537 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lan17g0330 537 SUPERFAMILY Chaperone J-domain 55 130 IPR036869 -
Lan17g0330 537 MobiDBLite consensus disorder prediction 278 298 - -
Lan17g0330 537 Gene3D DnaJ domain 54 149 IPR036869 -
Lan17g0330 537 PRINTS DnaJ domain signature 65 83 IPR001623 -
Lan17g0330 537 PRINTS DnaJ domain signature 83 98 IPR001623 -
Lan17g0330 537 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lan17g0330 537 SMART dnaj_3 62 122 IPR001623 -
Lan17g0330 537 Pfam DnaJ domain 63 127 IPR001623 -
Lan17g0330 537 ProSiteProfiles dnaJ domain profile. 63 130 IPR001623 -
Lan17g0330 537 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 37 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0330 Lan-Chr17 2412201 2416158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0330 65 127 C2H2 Transcription Factor Family AT1G74250 43.939 1.11e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0330 - - gmx:100805332 861.292