Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0323 ATGGAGGAAATGATTGACACTACTAAGAAAAAGGTGCTAATTGATATTGTTAGATTGGTACAGAAAAGAGGCCTAAAGGGAAAGCTAGGAGATTGGAAAGAATTTTTGGACAATCAAGATAGAAAATTTGGTTCCAATTTGAGTGATCCTTCAAAGAGGTCTCATGAGGTTTTGGCTTCATTTCTCAAGACTTTTCATGAGGAAGATCATTTGAAGTTTTTGTTCAATGTCATGCAACAACATTCAAATAGAGAGGTACTGGAGCAATTGAAAGATAAGTCTTATGATTCTCCTGAGCAGAGGCTAGTCCAAGAAACTCTCCAGAATCCATCATATACATTCGATTATTCATTTAAGTCACTTAATGAGGGGTGGGAGGTTATAAACCTTGAAGACATAAACAAGGCGATCAGATATACTTCAATGGTATCTATTGATTGTGAAATGGTTAGCTGTGAAGATGGGACTGAAGCATTAGTAGAAGTCTGTATAGTTGACCGCAATTTAGAGGTCAAACTGCATGAACGTGTAAAACCCAACAAAGCAATTGCAGACTACAGAACAGATATTACCGGTGTCTCTTCTAAAGATCTAGATGGAGTAACTTGCACGTTGGCAGATATACAGGAGTCCATGAAGAAGCTGTTATCAGATGGAACCATATTAGTGGGACACAGTTTATATAATGACCTACATGTGCTGAAGCTATATCATGTTAAAGTGATTGACACTTCATATATCTTCCAAAGTTTGGACGGACCTATTCACAAGAGGCCTTCTCTGAGTAGCTTATGCAAGGCTGTGTTAGGCTATGATGTTCGGGAAAAGGGTGCTACACATAGTTGTGTAGATGATGCGCGTGCAGCAATGAAACTTGTTCTTGCCAAGATCGAGCATGGTGTTGATAGAGCAATTCATTTGATTGAAGAGCCTATTCCTGAAAGTGAGATGGCAAAGCTTCTTCTTCACGGGATACCAACCAGTGTGAACAGTGAAGAACTACATAATGTCCTTCCTGGAGACTTCACAATAGAACTGAAGATTTCTAAGAAAGGTCGAGGAGAGAAGTATTCTGCCTTTGCAATTTTTAAGAACCCACAAGAGGCGCTTCAAGCATATGAAAATGTCCAAGGCAACCCAGAGAAGGATACTGCAAACCGCCCGCAGAAACTCGTAAAGTTTAAGCTCAGGGCAGATAAGACAGCCAGCCTATACGTTCGGAAAATGGCACCTGATGACAACCATGACCAGATTCCTTGTAAGAGAGCTTTACAAGTGGATGATGATGCATTTGATGTTTCCAAGAAAGCAAAGGTGGAGCCTGAGTCAAATGAGTGTGACATTGATGCTCTGAAGAATGAGATTGAAGCATTGAGACAACAATTGAAGGAAAAGGACATGTTGATTGAAACATTGCAGAAACAAAAGGATTTTGGAATATACAAGGTGCATAATAAAAGGGTACCCCAGAAAAAAAGAAAAAGGATGACGAGGTAG 1497 0.3975 MEEMIDTTKKKVLIDIVRLVQKRGLKGKLGDWKEFLDNQDRKFGSNLSDPSKRSHEVLASFLKTFHEEDHLKFLFNVMQQHSNREVLEQLKDKSYDSPEQRLVQETLQNPSYTFDYSFKSLNEGWEVINLEDINKAIRYTSMVSIDCEMVSCEDGTEALVEVCIVDRNLEVKLHERVKPNKAIADYRTDITGVSSKDLDGVTCTLADIQESMKKLLSDGTILVGHSLYNDLHVLKLYHVKVIDTSYIFQSLDGPIHKRPSLSSLCKAVLGYDVREKGATHSCVDDARAAMKLVLAKIEHGVDRAIHLIEEPIPESEMAKLLLHGIPTSVNSEELHNVLPGDFTIELKISKKGRGEKYSAFAIFKNPQEALQAYENVQGNPEKDTANRPQKLVKFKLRADKTASLYVRKMAPDDNHDQIPCKRALQVDDDAFDVSKKAKVEPESNECDIDALKNEIEALRQQLKEKDMLIETLQKQKDFGIYKVHNKRVPQKKRKRMTR* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0323 498 PANTHER SMALL RNA DEGRADING NUCLEASE 2 14 432 - -
Lan17g0323 498 Coils Coil 448 475 - -
Lan17g0323 498 CDD REX1_like 143 294 IPR034922 -
Lan17g0323 498 SUPERFAMILY Ribonuclease H-like 142 297 IPR012337 -
Lan17g0323 498 SMART exoiiiendus 141 302 IPR013520 -
Lan17g0323 498 Pfam Exonuclease 143 292 IPR013520 -
Lan17g0323 498 Gene3D - 138 308 IPR036397 GO:0003676
Lan17g0323 498 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 14 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0323 Lan-Chr17 2362880 2367441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0323 86 292 C2H2 Transcription Factor Family AT2G48100 29.817 1.78e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0323 K14570 - gmx:100785565 628.246