Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0298 ATGGGTCTCTGTATTTCTAAACCCTCTTCAAATCCCACACCGCTTCAGCGAAACTCCGAATCTCACTCCACCACCGTCAATGGCGACAATCCTATCGAAGAACCAGACAATGCTAAAAAATCTCCGTTATTCCCGTTTTACACTCCAAGTCCAGCGAACTACTTCTTCTCCAAGAAATCTCCGGCGAATTCGACTTCCAACTCCACGCCTGGGCGGTTTTTCAAGCGGCCATTCCCGCCGCCATCTCCGGCGAAGCATATTAGAGCAGTGCTGGCTCGCCGCCATGGTTCGGTGAAGCCGAACGAGGCTACGATAGTGGAAGGGAATGAAGCTGATGCGGTAGCTACCGCGCTTGATAAGAGTTTTGGATTCTCCAAGCATTTTGTAAAGAAATATGAAGTGGGAAGTGAAATTGGGAGAGGGCATTTTGGGTATACTTGTGTTGCAAAATTTAAGAAAGGAGTGATGAAAGGTCAGCAAGTGGCTGTCAAAGTCATCCCTAAAGCAAAGATGACCACTGCCATTGCTATTGAGGATGTGAGAAGGGAAGTAAAAATATTGAGAGCTTTGACTGGACACAAGAATCTAGTACAATTCTATGATGCATACGAAGACCATGATAATGTCTATATAGTAATGGAATTGTGCGAAGGAGGGGAGTTGTTGGATAGAATACTATCAAGAGGTGGGAAATACACAGAGGAAGATGCAAAATTTGTCCTAAGACAAATACTGGATGTTGTTGCTTTTTGCCATCTACAGGGTGTAGTGCATCGTGATCTTAAACCTGAGAACTTCTTGTTCACATCCAAGGATGAGAACTCAGAGCTGAAGGCCATAGACTTTGGTTTGTCGGATTTTGTAAAGCCAAATGAAAGGCTTAATGATATTGTTGGTAGTGCCTACTATGTGGCTCCTGAAGTTCTATACAGAGCTTACAGTACAGAGGCTGATATCTGGAGCATTGGTGTCATTGCATATATTTTATTATGTGGCAGTCGACCCTTTTGGGCTCAGACTGAGTCTGGTATCTTTCATGCTGTAGTGAAAGCTAATCCAAGTTTTGATGAACCTCCTTGGCCTTCTCTATCTTCTGAGGCAAAGGATTTTGTTAAGAAATTGCTAAACAAAGATCCACGGAGAAGAATGACTGCAGCACAGGCATTAAACCATCCATGGATTAAAAACTATAAGGATGTTAAAGTACCTCTGGATATTCTAATATTCAAGCTTATGAAGGCATACGTGCACTCCTCCTCTCTACGAAAAGCAGCTTTAAGGGCTCTGTCTAAAACTTTAACGGTTGATGAGCTATTTTATATGAAGGAGCAGTTTGCACTTTTAGAGCCAAACAAAAATGGAACTGTTAGCTTGGAAAATATCGAAGCGGCCTTGATGAAAAATGCAACAGATGCTATGAAGGAGACACGCATTCCTGACCTTCTGGCATCACTTAATGCATTGCAACATAGAAGGATGGATTTTGATGAGTTTTGCGCAGCTGCACTTAGTGTTCATCAACTTGAAGCACTTGATCGATGGGAGCAACATGCACGTTGTGCCTATGAACTTTTTGAAAAGGACGGAAACAGGGCTATAGTCATTGAGGAGCTAGCTTCGGAACTTTGCCTTGGTCCATCTGTCCCTGTTCATTCTGTTCTTCATGACTGGATTCGGCACACTGATGGAAAATTGAGCTTCCTTGGATTTGTGAAATTGTTGCATGGCCCATCTCGGAGTCTTTCAAAAGCTCAATAG 1758 0.4306 MGLCISKPSSNPTPLQRNSESHSTTVNGDNPIEEPDNAKKSPLFPFYTPSPANYFFSKKSPANSTSNSTPGRFFKRPFPPPSPAKHIRAVLARRHGSVKPNEATIVEGNEADAVATALDKSFGFSKHFVKKYEVGSEIGRGHFGYTCVAKFKKGVMKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKFVLRQILDVVAFCHLQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPNERLNDIVGSAYYVAPEVLYRAYSTEADIWSIGVIAYILLCGSRPFWAQTESGIFHAVVKANPSFDEPPWPSLSSEAKDFVKKLLNKDPRRRMTAAQALNHPWIKNYKDVKVPLDILIFKLMKAYVHSSSLRKAALRALSKTLTVDELFYMKEQFALLEPNKNGTVSLENIEAALMKNATDAMKETRIPDLLASLNALQHRRMDFDEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELCLGPSVPVHSVLHDWIRHTDGKLSFLGFVKLLHGPSRSLSKAQ* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0298 585 Pfam Protein kinase domain 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0298 585 Gene3D - 414 573 - -
Lan17g0298 585 SMART serkin_6 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0298 585 Gene3D - 434 503 - -
Lan17g0298 585 SUPERFAMILY Protein kinase-like (PK-like) 129 425 IPR011009 -
Lan17g0298 585 MobiDBLite consensus disorder prediction 58 72 - -
Lan17g0298 585 PANTHER SERINE/THREONINE-PROTEIN KINASE 42 580 - -
Lan17g0298 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Lan17g0298 585 Gene3D Transferase(Phosphotransferase) domain 1 222 413 - -
Lan17g0298 585 MobiDBLite consensus disorder prediction 1 43 - -
Lan17g0298 585 MobiDBLite consensus disorder prediction 1 31 - -
Lan17g0298 585 SUPERFAMILY EF-hand 422 576 IPR011992 -
Lan17g0298 585 ProSitePatterns Protein kinases ATP-binding region signature. 138 164 IPR017441 GO:0005524
Lan17g0298 585 MobiDBLite consensus disorder prediction 58 81 - -
Lan17g0298 585 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 42 580 - -
Lan17g0298 585 CDD STKc_CAMK 131 393 - -
Lan17g0298 585 Gene3D Phosphorylase Kinase; domain 1 125 221 - -
Lan17g0298 585 ProSiteProfiles Protein kinase domain profile. 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0298 Lan-Chr17 2087816 2092289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0298 1 585 EF-hand Containing Proteins AT3G50530 73.734 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan17g0298 Pkinase 1.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0298 K00924 - tcc:18611088 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0298 17 2087816 2092289 Lan18g0493 18 9374509 9379859 PCT