Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0292 ATGTCGTTTTCGTTGTTCTCAACGCCGCAACAGCAATCGCAGCAACAGAATCTGTTTCAGCCGCAACAACAGCAACAACAACAACAACAACAGTCCCCTTTCCAGCAGAGTAGTTTTTTCCAACAGCAACCGCAACAACAGCAACAACAACAACAGCAATTTCAAGCACAGCAGCAACAACAGCAACAACATCAAAATCAGATGTTTCTGTTCACTAACGATAAAACTCCCGCTAGTTATAGCACCAGTTGGACCGATCTACATCCTGATTCTCAAAAGTTTCTTCTTCAGATCGAGGAACGGATATTGGAGTATAGGGATGAAAGCCAGAGATTAGACCAGTCTAGTCGTCTTTATGATTCTTCTGTTTCCATTGATGGATTTGAGGTTGATGCTAGCCATATTGTTCAGGAACTTGGTGGAATTGGCACTGCTATGGATAGACAGAAAACATTGCTGCATGAACTGATGTCTGTTGTTAAGGATATGTTACGCAACACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGTCCAAGGTTCCTTCATCCCAGTGGGGGTGCATCAAGTGCCACTGCCCCGTCACAGACTCCTGGAGGGCCACAAAGTTCAAGTAACCAACCAACAGCTACATCTATAGTGCCAGTTTTTGATTTCTACAATGGTCTTCCAAGGAAACCGTCACCCTTTTTACAGCAGACAGTTTTAAGATTCGAGAAGTATATTGGTGAATGCCATCAGTGGATTGAAGAGTTGGAGCAGCTGCTTCTCTTAGACTCTGAGAGAAATGCTTCCAGCCATGGATCTTCATTATTGCAATCTCTTCCCAAAGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCCAAGGTGGAGAGCATTCATCAGTATATTGAATCTATGAAATCAGCATACCTAGCTGATCAGCGCCGCCGGGGTGAGGTAAATGATCCATTTCTAGAGGCTGACCGACGAGAAACTGCGAGACAAGAAGCTGCTTCTAAGAGAGTTCATCCAACATTGCATTTGCCTGCAAATTCACAACCCTCAACCCAAGTTGCTGGATTGTTTTCTAGTTCAGGAACTCAAGGAGCATTGCCTGCCCCGCAGACCTCTGCAGCACCTTCATCATCATCATTATCATCATCTTCGGGGAGTGGATTCTCTCTTTTTAGTACACCTTCTTCTGCTCCATCTTCCTCTATGTCTTTGTTTGCAACACCATCAACTCCTGCTCCAGGATCCTCTTGGTTCGCATCATCTAGTGCTACAGCTCCATCCTCACTTTTTGGTTCTGCAACATCAGTACCTGGTCCTGCTTCAACTCCTTCATTGTTTAGTAATACTGCTTCATTGTTTGGTTCAACTCCAGGTTCACTCTTTTCACGTGCTGTGACAGGATCAGGGGCGAGCTTTGGACCTGGATCAAAAAATGCACGGCCAAAATCCAGAACTGCTAGACGCTAA 1473 0.4474 MSFSLFSTPQQQSQQQNLFQPQQQQQQQQQQSPFQQSSFFQQQPQQQQQQQQQFQAQQQQQQQHQNQMFLFTNDKTPASYSTSWTDLHPDSQKFLLQIEERILEYRDESQRLDQSSRLYDSSVSIDGFEVDASHIVQELGGIGTAMDRQKTLLHELMSVVKDMLRNTEVAVRSFMMLRPRFLHPSGGASSATAPSQTPGGPQSSSNQPTATSIVPVFDFYNGLPRKPSPFLQQTVLRFEKYIGECHQWIEELEQLLLLDSERNASSHGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALPAPQTSAAPSSSSLSSSSGSGFSLFSTPSSAPSSSMSLFATPSTPAPGSSWFASSSATAPSSLFGSATSVPGPASTPSLFSNTASLFGSTPGSLFSRAVTGSGASFGPGSKNARPKSRTARR* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0292 490 Coils Coil 95 115 - -
Lan17g0292 490 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 5 484 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Lan17g0292 490 MobiDBLite consensus disorder prediction 343 381 - -
Lan17g0292 490 Coils Coil 47 67 - -
Lan17g0292 490 PANTHER NUCLEOPORIN P58/P45 5 484 - -
Lan17g0292 490 MobiDBLite consensus disorder prediction 188 208 - -
Lan17g0292 490 MobiDBLite consensus disorder prediction 185 208 - -
Lan17g0292 490 MobiDBLite consensus disorder prediction 1 59 - -
Lan17g0292 490 MobiDBLite consensus disorder prediction 319 338 - -
Lan17g0292 490 Gene3D - 226 316 - -
Lan17g0292 490 MobiDBLite consensus disorder prediction 319 381 - -
Lan17g0292 490 MobiDBLite consensus disorder prediction 466 490 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0292 13 490 NAC Transcription Factor Family AT4G37130 61.719 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0292 K14307 - gmx:100805204 615.15