Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0285 ATGTTTCTTCATCACCAAATAAACCTTGCTATTAGCCTCACAATCTTGATGGTATACACAATAAGAGCACAAAAGTGTGAGCATCATTGTGGCAAACAAACCCTGCAATATCCTATTGGCTTCTCTAAGGGTTGTGGTGTACAACTAAACTGTACCAACAACCAAATCCACCTTGGTGATTTTCTTATCCAAAACGTAACAAGTAGCAGCATATTCATTAATCTTCCATCAAAATGCAACCGTAGCATGCAATCAATTGTTCCACTTTTCAGTGATAACTTTGCCCCCACATGGGACAACAGTTTTCTAGTACAAGATTGTTCAACTCCTCTCGGTGGCTGCGTTATTCCAACCTCAAGTTTCTTAGGGAACCAGACTGAGGTGGAAAATTGTGACAGTAAAAGTGGCAACATAAGTTGTTTTACTAGGTCGGAAAAGCAACATGAAGAGTTAGATGTTGTGTCATACGAGGAGTTGAACCAAAGTAAGTGTAAGTTCTTGTTCTCATCGGTTGCTATTGGGCAGAGGATTGAGTTTCAGGTTGTTGAGTTGCGGTGGTGGCTTTATGGTTCGTGTGGTCAATGTTCTCCAAATGCTACCTGCGCCACGGTTAATCTTCAAGAAGGGATGTTTGGGTTCAGGTGCCACTGCTATGATGGTTTCATTGGAGATGGTTTCACTGATGGCACCGGTTGCAAGAAAGTTTCATCATCAAGTTGCAGTTCTTCAGCACTAGTTTCTGGTGCATGTGGGAAAGCAACCCAGATAGGTGTTATTGTTGGAGTGATAGTAGCTGGAGCTATGGTGGTAGCTTTACTCGCTCTTGTATGCTATTGTGTTAAGCACCGTTCTACTCGGTTGAGAAAACATACAAGAGCGAAGCGCCTAATACATGATGCTGCAGGCAACTCTAGTGTACCTTTATACCCATATAAAGAAATAGAAAGAGCCACAAATTCCTTCTCTGAGAAACAGATGCTTGGAACTGGGGCTTTTGGCACAGTTTATGCAGGAAAACTTCACAATGATGAATGGGTTGCTATAAAAAAGATAAGGTATAGAGACACCAATAGTGTTGATCAAGTCATGAATGAGATAAAGCTTCTTTCTTCAGTGAGTCACCCAAATTTAGTTCAACTCCTAGGTTGTTGCATTGAAGGGGGAGAACAGATTCTTGTTTATGAGTATATGCCTAATGGAACACTCTCTGAGCATTTGCAAAGAGAGAGGAGTAAAGGTCTTCCATGGACAATAAGACTTACCATTGCTACTGAAACTGCTAATGCTATAGCATATCTACATTCTGCAATTCACCCTCCAATTTACCACAGAGACATAAAATCTACTAATATATTGTTGGATTATAGCTACAAATCTAAAGTAGCAGATTTTGGACTTTCTAGGCTTGGCCTGACAGAAACATCACATATCTCAACTGCACCACAAGGTACTCCAGGCTATGTTGATCCACAATATCACCAAAACTTTCATCTTTCTGATAAAAGTGATGTGTATAGTTTTGGAGTGGTTTTGGTAGAGATAATAACTGCTAAGAAAGTGGTTGATTTTGCTAGGCCTCAGAGTGAGGTTAATTTGGCTGCACTTGCTGTTGAAAGGATTAGGAGTGGATCTATTGATGAGATAATAGATCCTTTCCTTGAACCAAATAGAGATGCATGGACACTATATTCCATTCATAAGGTGGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGACTGAAGTGGCAGAGGAGTTAGAACACATCAGACGCAGTGGATGGGCAACTATGGAGGAAAATATATGCACAGCTTCGTCCATCGGATCCGCGAATTCATCGCCGCCTCGCAATGGAAGTGAGAGGTCTTTGAGTGGTATTAATCTTAAGAGAGCAGGGAAAGGGAGTGAGAGATTGATTGTTCCACAAAGGCCAGATAGTACATTGCAAATTGTGGAGGAAGATAATTCTCCTATATCAGTGCATGATCCTTGGTCAAGTGGACATAGCTCACCTTCAACAAACAGCTTGCTGGAAAATGTAGTTCAGTGA 2070 0.4116 MFLHHQINLAISLTILMVYTIRAQKCEHHCGKQTLQYPIGFSKGCGVQLNCTNNQIHLGDFLIQNVTSSSIFINLPSKCNRSMQSIVPLFSDNFAPTWDNSFLVQDCSTPLGGCVIPTSSFLGNQTEVENCDSKSGNISCFTRSEKQHEELDVVSYEELNQSKCKFLFSSVAIGQRIEFQVVELRWWLYGSCGQCSPNATCATVNLQEGMFGFRCHCYDGFIGDGFTDGTGCKKVSSSSCSSSALVSGACGKATQIGVIVGVIVAGAMVVALLALVCYCVKHRSTRLRKHTRAKRLIHDAAGNSSVPLYPYKEIERATNSFSEKQMLGTGAFGTVYAGKLHNDEWVAIKKIRYRDTNSVDQVMNEIKLLSSVSHPNLVQLLGCCIEGGEQILVYEYMPNGTLSEHLQRERSKGLPWTIRLTIATETANAIAYLHSAIHPPIYHRDIKSTNILLDYSYKSKVADFGLSRLGLTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAKKVVDFARPQSEVNLAALAVERIRSGSIDEIIDPFLEPNRDAWTLYSIHKVAELAFRCLAFHSDMRPTMTEVAEELEHIRRSGWATMEENICTASSIGSANSSPPRNGSERSLSGINLKRAGKGSERLIVPQRPDSTLQIVEEDNSPISVHDPWSSGHSSPSTNSLLENVVQ* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0285 689 ProSitePatterns Protein kinases ATP-binding region signature. 327 350 IPR017441 GO:0005524
Lan17g0285 689 Pfam Protein kinase domain 322 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0285 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Lan17g0285 689 SUPERFAMILY Protein kinase-like (PK-like) 300 594 IPR011009 -
Lan17g0285 689 ProSiteProfiles Protein kinase domain profile. 321 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0285 689 Gene3D Laminin 193 227 - -
Lan17g0285 689 MobiDBLite consensus disorder prediction 664 689 - -
Lan17g0285 689 SMART serkin_6 321 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0285 689 Gene3D Transferase(Phosphotransferase) domain 1 397 614 - -
Lan17g0285 689 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 671 IPR045274 GO:0007166
Lan17g0285 689 Gene3D Phosphorylase Kinase; domain 1 275 396 - -
Lan17g0285 689 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 17 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0285 Lan-Chr17 1992429 1997276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0285 1 687 Receptor kinase-like Gene Family AT2G23450 56.497 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan17g0285 Pkinase 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0285 - - gmx:100779130 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0285 17 1992429 1997276 Lan18g1023 18 15264252 15268741 LSH
Lan17g0285 17 1992429 1997276 Lan6g1393 6 16968705 16974376 LSH
Lan17g0285 17 1992429 1997276 Lan6g1393 6 16968705 16974376 PCT
Lan6g1393 6 16968705 16974376 Lan17g0285 17 1992429 1997276 PCT