Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0273 ATGGGAATAGCAACACCACCACCACCACCACTTCCAAGTATCATTCTTTCTCATTCAAAGACACAGCCAAGTGAATCTTGTTCCAATTCCATGTCACAAGATTATCAACAAGGAATCTTCACCTTCTCCAATGGGTTCGAGAGAACAACAGTAACTCATCAAGATCAGCAGCAGGAGAATCAGATCCGGAGGGACAAGGTGAGGTTGCAACAAGGCTTCCAACCACCACCACCGCAGCCACCACCGCCATTAGTTGGGATAGAAGAAGAACAAGGAGGGATCCCGGTTTACGAACCAGCAGGGATGCTGTCAGAGATGTTTAATTTCCCTCATGCCGGCGACACTGCCGCTGAATTGTTGGAACAACAGCAGCAGATGACGGCGACGTTTCGGTCCTCGGGGCCTCAACCAATGACCAGTGGTAGCGAATGGTACGGAAGAAGACAAGGGATAATAACTGGGTTGGGACCGTTGGGAGATTCAACAAAGAATCATCATCATCAAAATGACAACAACTACAACCATCATCATCATCATTCTCAGATTTCAAGCATTAATGCAGCAGATTCAGCTGCTGCTCATCAAGCCATGCAACTTTTCCTTATGAACCCTCAAACAAGATCTCCTTCACCTCCTCCTCCTCCTCCTCCAAACTCTTCATCTTCCACTCTTCACATGTTACTTCCCAATCCTTCTTCTAATAACCCCCTTCAAGGCTTTGCTACAAGTTCAACTGCTGGTGGGTCTTATGGTCAATTCACATGGGTTCCTGATCATAGCACTGAAGGAGGAGGCAATACTGGTGGCGTTGTGGAAGGTCAAGGTCTATCGTTATCATTGTCCTCTTCGTTGCAGCACTTGGAAGCTGCAAAAGCTGAAGAATTCAGGATGGGGGAAAGTGGTTTTCTATATTACAATCAAGGACCAGAAGGTGCTTCTTCGTCTCACTATCCGTACAGGAATCTTGGTAACAGTCATCATCAGCAGCAACAAGCATTGCATTTACAAGGTGCTATGGGACACCAGGTACATCATGTTGGATTTGGATCATCATCATCATCATCCTTAAGTGCAGTAAATGTTCTGAGAAACTCAAAGTATGTTAGAGCTGCACAAGAATTGCTTGAAGAATTTTGCAGTGTAGGGAGGGGTCAGTTTAAGAAGAACAAGTTCAATAGACAAAACTCAAACCCTAATAATTCAAACCCCGGTGGCGATGGTGGAGGTCCTTCTAATTCATCCTCATCAAAAGATCATCCTCCTCCTCCTACTATTTTGTCAGCGGCAGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCAATGCTTGATGAGGTGGACCGAAGATACAACCACTACTGTGAACAAATGCAAATGGTAGTAAACTCATTTGATATAGTAATGGGTTTGGGTGCAGCAGTTCCATACACGGCACTAGCACAAAAAGCAATGTCAAGGCATTTCCGGTGTCTGAAGGATGCAATAACAGCACAAGTGAAGCATAGTTGTGAGGTGCTAGGAGAGAAAGATGGTGCTGGTTCCTCAGGTTTAACAAAGGGAGAAACACCAAGGCTTAAGATGTTAGAACAAAGCCTGAGACAACAAAGAGCATTTCATCAAATGGGGATGATGGAACAAGATGCTTGGAGACCACAGAGAGGGTTACCTGAAAGATCTGTCAACATTTTGAGAGCTTGGCTTTTCGAGCATTTTCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAAACTGGGCTATCGAGAAATCAGGTATCAAATTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCTATGGTAGAAGACATGTACCAACAAGAATTTAAAGAAGTAGAGGGTGGTTCAGAAGAGAAAGAAAATAGGAATGAAAGCAACAACAGCAATAGTGGCCAACTAGCACAAACTCCAATCACAGCAGCTACAACATCAACAGCAACAACAGCACTACCACCACCAACAATAACAACAACATTAACAACAGGCAAAAGATCCGATATCAATGCTCATGATAACGACCCTTCACTCGTTACAATCAATAGACAAGGCTTCTCGGAAAACCAAGCCTCCACCACCAACACAACCACCATTATCAATGCCACTCTCTCTGAAGTGGCGCCACCAGTGTCTCAGTCTTTAGATTCAGACCTGACTCCTCATATATCAATGGCAACTGATGACACGTGTCACCATGGTAACGCCGTTACAGGAGCTGATTATGGGACCCAGGTTTCTGCAGGTGGTGCTGACATTGGATCAACTCTCATTAGATTCGGGACCACCGCCGGTGACGTGTCACTTACCTTAGGGTTACGCCACGCCGGGAACATGCCGGAGAAAACACCTTTCTCTCTTAGAGACTTTGGAGGCATTTAA 2412 0.4515 MGIATPPPPPLPSIILSHSKTQPSESCSNSMSQDYQQGIFTFSNGFERTTVTHQDQQQENQIRRDKVRLQQGFQPPPPQPPPPLVGIEEEQGGIPVYEPAGMLSEMFNFPHAGDTAAELLEQQQQMTATFRSSGPQPMTSGSEWYGRRQGIITGLGPLGDSTKNHHHQNDNNYNHHHHHSQISSINAADSAAAHQAMQLFLMNPQTRSPSPPPPPPPNSSSSTLHMLLPNPSSNNPLQGFATSSTAGGSYGQFTWVPDHSTEGGGNTGGVVEGQGLSLSLSSSLQHLEAAKAEEFRMGESGFLYYNQGPEGASSSHYPYRNLGNSHHQQQQALHLQGAMGHQVHHVGFGSSSSSSLSAVNVLRNSKYVRAAQELLEEFCSVGRGQFKKNKFNRQNSNPNNSNPGGDGGGPSNSSSSKDHPPPPTILSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDIVMGLGAAVPYTALAQKAMSRHFRCLKDAITAQVKHSCEVLGEKDGAGSSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQDAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQEFKEVEGGSEEKENRNESNNSNSGQLAQTPITAATTSTATTALPPPTITTTLTTGKRSDINAHDNDPSLVTINRQGFSENQASTTNTTTIINATLSEVAPPVSQSLDSDLTPHISMATDDTCHHGNAVTGADYGTQVSAGGADIGSTLIRFGTTAGDVSLTLGLRHAGNMPEKTPFSLRDFGGI* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0273 803 MobiDBLite consensus disorder prediction 221 237 - -
Lan17g0273 803 MobiDBLite consensus disorder prediction 623 686 - -
Lan17g0273 803 MobiDBLite consensus disorder prediction 206 220 - -
Lan17g0273 803 Pfam Associated with HOX 361 498 IPR006563 -
Lan17g0273 803 SUPERFAMILY Homeodomain-like 552 618 IPR009057 -
Lan17g0273 803 MobiDBLite consensus disorder prediction 637 686 - -
Lan17g0273 803 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 84 792 - -
Lan17g0273 803 MobiDBLite consensus disorder prediction 203 237 - -
Lan17g0273 803 ProSiteProfiles 'Homeobox' domain profile. 548 611 IPR001356 GO:0003677
Lan17g0273 803 MobiDBLite consensus disorder prediction 151 189 - -
Lan17g0273 803 Pfam Homeobox KN domain 568 607 IPR008422 GO:0003677|GO:0006355
Lan17g0273 803 MobiDBLite consensus disorder prediction 163 177 - -
Lan17g0273 803 Gene3D - 554 616 - -
Lan17g0273 803 SMART prehox3 356 499 IPR006563 -
Lan17g0273 803 SMART HOX_1 551 615 IPR001356 GO:0003677
Lan17g0273 803 MobiDBLite consensus disorder prediction 388 421 - -
Lan17g0273 803 MobiDBLite consensus disorder prediction 1 32 - -
Lan17g0273 803 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 84 792 - -
Lan17g0273 803 CDD homeodomain 551 612 IPR001356 GO:0003677
Lan17g0273 803 MobiDBLite consensus disorder prediction 15 32 - -
Lan17g0273 803 MobiDBLite consensus disorder prediction 388 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0273 Lan-Chr17 1887131 1896115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0273 28 598 Homeobox Transcription Factor Family AT4G36870 51.792 1.23e-148 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lan17g0273 POX 2e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0273 - - lang:109332370 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0273 17 1887131 1896115 Lan18g1027 18 15296892 15304400 LSH
Lan17g0273 17 1887131 1896115 Lan6g0149 6 1075706 1083544 LSH