Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0270 ATGGTTGCCTTCTTTATTCCCTCACGTTCTTTAAGTCTTGTTCTGGCAATCATGTTGTTTTTCACAAATATTGCAGTTCAATCACAACAAATCAATGCAACAGATTTTTCATGCCCTGTGGATTCACCTCCTTCATGTGAAACATATGTAACATACATTGCACATTCTCCAAATTTCTTGAGTGTGGTCAGCATATCTAACATATTTGATACAAGCCCTTTATCTATTGCAAGAGCCAGTAACTTAGAGGCTGAAGATAACACACTGATTCCAGACCAAGTCTTACTAGTACCTGTAACTTGTAGTTGCATTGGAAACAGATCTTTTGCCAATATGTCCTATGTGATCAAGCTTGGTGATACCTACGAACTTGTCGTCGAAACTATATATGAGCACCTCACTAACTGGCTTGTAGTGGCAGATTTAAACCCTGGTCTGGTTCCAACTTTGTTGACAGTAGGTGTTGAAGTAATATTCCCTTTATTCTGCAGGTGCCCTTCAAAGAACCAATTGAACAAAGGGATAAAGAATTTGATTACTTATGTGTGGCAGCCTAATGATACTGTTTCCACTGTAAGTTCCAAGTTCGGCGCATCTTCGGCGGACATATTGAGTGAAAATAACTATGGTCAAAACTTCACTGCTGCAATCCACCAGCCATTTTTGATCCCAGTGACACAATTGCCACATCTTAGTCAACCTGAACCTTCAAATGCAAGAAAGAGCAGCATTAATCTCATGCTTATAATTGGCATTAGCTTAGGATGCACACTACTAGTTGCAGCTTTAGCAGTATTATTGGTGTATGTTTGTTATCTGAAAAAGAGTGTATTGAAAAGGAAAGCTTCTTTTGTTGAAACTGCAGATAGGCTACTTACCGGTGTTTCGGGTTATGTAAGTAAACCAACTGTGTATGAAATCGATGCAATTATGGAAGCAACCATGAACCTTAGTGAGCTGTGCAAGATTGGGGAATCAGTGTACAAGGCCAAAATGGATGGTCGGATTTTAGCTGTTAAAAAAGCCAAAGAGGATGTCTCAGAGGAGCTGAAGATTTTACAGAAGGTAAACCATGGAAATCTAGTGAAACTAATGGGTGTCTCTTCAGACAATGATGGAAATTTTTTCCTGGTTTATGAATATGCTGAAAATGGATGTCTTGATGAATGGATGTTCTCTAAGTCCACATCAAACTCAATGGTCTCACTCACATGGAGCCAGAGGATAAGCATAGCTGTGGATATTGCCATGGGTCTGCAATACATGCATGAACATACTCATCCAAGAATAGTCCATAGAGATATCACAACAAGTAATATCCTTATTGACTCAAACTTTAAGGCCAAGATATCAAATTTCTCTATGGCCAGAACTTCTACCAACCCTATGATGCCAAAAATAGATGTCTTCGCTTTCGGTGTGGTTCTGTTGGAGTTGCTTACTGGAAAGAAAGCCTTAACAACCAAAGAAAATGGTGAGGTGGTTATGTTGTGGAAGGATATTAGGAAAGTCTTTGATCTTGAAGAAGATAATAAAGAGGTGATGCTCCAAAGATGGATGGATCCTAAGCTAGAGAACTTATATCCAGTAGACTATGCTCTTCACTTGGCTTCATTAGCAGTGAATTGCACAGCAGATAAGCCTCTGTCAAGACCAACCATGGCAGAAATTGTTCTTACCCTCTCCCTTCTGGCTCAACCACCTCCTGCATCATTAGAGAGATCCTTGACTTCTTCTGGATTAGATGCTGAAGCTACTCAAACAATTGCTCCCGTAGCAGCTCGATGA 1788 0.3988 MVAFFIPSRSLSLVLAIMLFFTNIAVQSQQINATDFSCPVDSPPSCETYVTYIAHSPNFLSVVSISNIFDTSPLSIARASNLEAEDNTLIPDQVLLVPVTCSCIGNRSFANMSYVIKLGDTYELVVETIYEHLTNWLVVADLNPGLVPTLLTVGVEVIFPLFCRCPSKNQLNKGIKNLITYVWQPNDTVSTVSSKFGASSADILSENNYGQNFTAAIHQPFLIPVTQLPHLSQPEPSNARKSSINLMLIIGISLGCTLLVAALAVLLVYVCYLKKSVLKRKASFVETADRLLTGVSGYVSKPTVYEIDAIMEATMNLSELCKIGESVYKAKMDGRILAVKKAKEDVSEELKILQKVNHGNLVKLMGVSSDNDGNFFLVYEYAENGCLDEWMFSKSTSNSMVSLTWSQRISIAVDIAMGLQYMHEHTHPRIVHRDITTSNILIDSNFKAKISNFSMARTSTNPMMPKIDVFAFGVVLLELLTGKKALTTKENGEVVMLWKDIRKVFDLEEDNKEVMLQRWMDPKLENLYPVDYALHLASLAVNCTADKPLSRPTMAEIVLTLSLLAQPPPASLERSLTSSGLDAEATQTIAPVAAR* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0270 595 Gene3D Transferase(Phosphotransferase) domain 1 382 460 - -
Lan17g0270 595 Gene3D Transferase(Phosphotransferase) domain 1 461 565 - -
Lan17g0270 595 ProSitePatterns Tyrosine protein kinases specific active-site signature. 430 442 IPR008266 GO:0004672|GO:0006468
Lan17g0270 595 Pfam Protein tyrosine and serine/threonine kinase 340 459 IPR001245 GO:0004672|GO:0006468
Lan17g0270 595 Gene3D Phosphorylase Kinase; domain 1 294 381 - -
Lan17g0270 595 Pfam LysM domain 184 223 IPR018392 -
Lan17g0270 595 ProSiteProfiles Protein kinase domain profile. 285 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0270 595 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 19 595 - -
Lan17g0270 595 SUPERFAMILY Protein kinase-like (PK-like) 302 562 IPR011009 -
Lan17g0270 595 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 19 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0270 Lan-Chr17 1854537 1856743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0270 11 564 Receptor kinase-like Gene Family AT3G21630 30.832 5.71e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lan17g0270 PK_Tyr_Ser-Thr 5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0270 - - gmx:100301877 850.506