Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan17g0270 | ATGGTTGCCTTCTTTATTCCCTCACGTTCTTTAAGTCTTGTTCTGGCAATCATGTTGTTTTTCACAAATATTGCAGTTCAATCACAACAAATCAATGCAACAGATTTTTCATGCCCTGTGGATTCACCTCCTTCATGTGAAACATATGTAACATACATTGCACATTCTCCAAATTTCTTGAGTGTGGTCAGCATATCTAACATATTTGATACAAGCCCTTTATCTATTGCAAGAGCCAGTAACTTAGAGGCTGAAGATAACACACTGATTCCAGACCAAGTCTTACTAGTACCTGTAACTTGTAGTTGCATTGGAAACAGATCTTTTGCCAATATGTCCTATGTGATCAAGCTTGGTGATACCTACGAACTTGTCGTCGAAACTATATATGAGCACCTCACTAACTGGCTTGTAGTGGCAGATTTAAACCCTGGTCTGGTTCCAACTTTGTTGACAGTAGGTGTTGAAGTAATATTCCCTTTATTCTGCAGGTGCCCTTCAAAGAACCAATTGAACAAAGGGATAAAGAATTTGATTACTTATGTGTGGCAGCCTAATGATACTGTTTCCACTGTAAGTTCCAAGTTCGGCGCATCTTCGGCGGACATATTGAGTGAAAATAACTATGGTCAAAACTTCACTGCTGCAATCCACCAGCCATTTTTGATCCCAGTGACACAATTGCCACATCTTAGTCAACCTGAACCTTCAAATGCAAGAAAGAGCAGCATTAATCTCATGCTTATAATTGGCATTAGCTTAGGATGCACACTACTAGTTGCAGCTTTAGCAGTATTATTGGTGTATGTTTGTTATCTGAAAAAGAGTGTATTGAAAAGGAAAGCTTCTTTTGTTGAAACTGCAGATAGGCTACTTACCGGTGTTTCGGGTTATGTAAGTAAACCAACTGTGTATGAAATCGATGCAATTATGGAAGCAACCATGAACCTTAGTGAGCTGTGCAAGATTGGGGAATCAGTGTACAAGGCCAAAATGGATGGTCGGATTTTAGCTGTTAAAAAAGCCAAAGAGGATGTCTCAGAGGAGCTGAAGATTTTACAGAAGGTAAACCATGGAAATCTAGTGAAACTAATGGGTGTCTCTTCAGACAATGATGGAAATTTTTTCCTGGTTTATGAATATGCTGAAAATGGATGTCTTGATGAATGGATGTTCTCTAAGTCCACATCAAACTCAATGGTCTCACTCACATGGAGCCAGAGGATAAGCATAGCTGTGGATATTGCCATGGGTCTGCAATACATGCATGAACATACTCATCCAAGAATAGTCCATAGAGATATCACAACAAGTAATATCCTTATTGACTCAAACTTTAAGGCCAAGATATCAAATTTCTCTATGGCCAGAACTTCTACCAACCCTATGATGCCAAAAATAGATGTCTTCGCTTTCGGTGTGGTTCTGTTGGAGTTGCTTACTGGAAAGAAAGCCTTAACAACCAAAGAAAATGGTGAGGTGGTTATGTTGTGGAAGGATATTAGGAAAGTCTTTGATCTTGAAGAAGATAATAAAGAGGTGATGCTCCAAAGATGGATGGATCCTAAGCTAGAGAACTTATATCCAGTAGACTATGCTCTTCACTTGGCTTCATTAGCAGTGAATTGCACAGCAGATAAGCCTCTGTCAAGACCAACCATGGCAGAAATTGTTCTTACCCTCTCCCTTCTGGCTCAACCACCTCCTGCATCATTAGAGAGATCCTTGACTTCTTCTGGATTAGATGCTGAAGCTACTCAAACAATTGCTCCCGTAGCAGCTCGATGA | 1788 | 0.3988 | MVAFFIPSRSLSLVLAIMLFFTNIAVQSQQINATDFSCPVDSPPSCETYVTYIAHSPNFLSVVSISNIFDTSPLSIARASNLEAEDNTLIPDQVLLVPVTCSCIGNRSFANMSYVIKLGDTYELVVETIYEHLTNWLVVADLNPGLVPTLLTVGVEVIFPLFCRCPSKNQLNKGIKNLITYVWQPNDTVSTVSSKFGASSADILSENNYGQNFTAAIHQPFLIPVTQLPHLSQPEPSNARKSSINLMLIIGISLGCTLLVAALAVLLVYVCYLKKSVLKRKASFVETADRLLTGVSGYVSKPTVYEIDAIMEATMNLSELCKIGESVYKAKMDGRILAVKKAKEDVSEELKILQKVNHGNLVKLMGVSSDNDGNFFLVYEYAENGCLDEWMFSKSTSNSMVSLTWSQRISIAVDIAMGLQYMHEHTHPRIVHRDITTSNILIDSNFKAKISNFSMARTSTNPMMPKIDVFAFGVVLLELLTGKKALTTKENGEVVMLWKDIRKVFDLEEDNKEVMLQRWMDPKLENLYPVDYALHLASLAVNCTADKPLSRPTMAEIVLTLSLLAQPPPASLERSLTSSGLDAEATQTIAPVAAR* | 596 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan17g0270 | 595 | Gene3D | Transferase(Phosphotransferase) domain 1 | 382 | 460 | - | - | |
Lan17g0270 | 595 | Gene3D | Transferase(Phosphotransferase) domain 1 | 461 | 565 | - | - | |
Lan17g0270 | 595 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 430 | 442 | IPR008266 | GO:0004672|GO:0006468 | |
Lan17g0270 | 595 | Pfam | Protein tyrosine and serine/threonine kinase | 340 | 459 | IPR001245 | GO:0004672|GO:0006468 | |
Lan17g0270 | 595 | Gene3D | Phosphorylase Kinase; domain 1 | 294 | 381 | - | - | |
Lan17g0270 | 595 | Pfam | LysM domain | 184 | 223 | IPR018392 | - | |
Lan17g0270 | 595 | ProSiteProfiles | Protein kinase domain profile. | 285 | 564 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan17g0270 | 595 | PANTHER | SERINE/THREONINE RECEPTOR-LIKE KINASE NFP | 19 | 595 | - | - | |
Lan17g0270 | 595 | SUPERFAMILY | Protein kinase-like (PK-like) | 302 | 562 | IPR011009 | - | |
Lan17g0270 | 595 | PANTHER | LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED | 19 | 595 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan17g0270 | Lan-Chr17 | 1854537 | 1856743 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan17g0270 | 11 | 564 | Receptor kinase-like Gene Family | AT3G21630 | 30.832 | 5.71e-65 | 222 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Lan17g0270 | PK_Tyr_Ser-Thr | 5e-24 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan17g0270 | - | - | gmx:100301877 | 850.506 |