Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0269 ATGAGTCACTTTCCTTTAATCCCTTCCTTCATTTTCACCCTATTGTTCTGCACCTTCTCTTTGATTGAGGGGCAGCAACCTTATATTGGTTTAGGCACAACAGCATGTTATAGAAAGGGTAACTCAAAATCAATCCGTGGTTACATTTGTAATGGTGCAAATAAAAGTTGCCAAGCTTACCTTACCTTCAGATCTCAACCCCTTTACAGTTCTGTTTCCAAAATATCAGCTTTGTTAAGTTCTGACCCATCCCAGCTTGCAGAAATAAACTCAGTCTCCCTTAATGGCACTTTTGAAACAAACAAGCTAGTAATTGTTCCAGTCAAATGTTCTTGTGCAAGTGAGTATTATCAGGCAAACACATCTTATGTGGTCCAGAATGCAGACACACCCTTTTTGATTGCTAGCAACACTTTTGAAGGCCTCTCAACATGTCAAGCTTTGCAGAATGAAAACCACAATCCTTGGAACATGTTCCAAGGTAGAGAACTTTTAGTTCCTCTTAGATGTGCTTGTCCAACAAAGAATCAAACGAAGAAAGGTGTCAAGTATCTTTTAAGTTACTTAGTAAAGGGGGGTGATTTTGTTTCACTCGTTAGTGAAAAATTTGGTGTCAAAACTGAGACCACTCTTGAAGCTAATAATCTTACTATGACAAATGCCACCATCCAACCCTTCACCACTCTTCTAGTTCCCCTTCATGATAAGCCCTCAAATTCTCAAACCGTTTCTTCAGCTCCACCACCTTCACTTCCCTCTTCTTCCACCACAGATAAAAGCTCAAACAAAAAGTGGGTGTATGCAGTTTCTATTGCTGCTGGTGTTGGAGTTATTGTCTTAGTATTAATTCTTTGTGCTATAAGTTTCTATATACACCATAGAAAAATGAAAAATAAAAAAGATCATGCAGCTGTTTCTGAGAGTTTTGATGCAATTGAGAGTTCACAAGGGAGACAAAGAGAGGAAGAATCTAAACAATTGTCAGAGATCATATCTGGCATAGCTCAATCATTCAAAGTGTATGCTTTTGAGGAACTACAGCATGCAACAGATAACTTCAATCCAAGCTATTGGATTAAAGGATCTGTTTTTCACGGCGTTATTAACGGAGATTTGGCTGCAATTAAAAAGGTTGAAGGAAATGTGTTAAAGGAAATTGAGCTACTGAACAAAGTGAACCATGCTAACGTTATTCGCCTCTCCGGTGTTAGCTTGAATGAAGGTCATTGGTATCTTGTTTATGAGTATGCTACTAATGGAGCCTTGAGTGAATGGATCTACTTCAACAACAACATGAATGGGAAGTTTCTAAGTTGGACAAAAAGAATACAAATTGCATTTGATGTGGCCACAGGACTTGACTATCTTCATAGTTTCACTTCCCCTCCACATATCCATAAGGATCTAAAGAGTAGTAACATTCTTTTGGACCATGATTTAAGGGCAAAAGTTTCAAACTTAAGACTTGCTAGATCCGTGGAAGTTCAAGAGGGTCAGCAACTTCCTTTGACAAGGCATATTATTGGGACAAGAGGTTACATGGCTCCAGAGTATTTGGAAAATGGTTTAGTATCTACAAAGCTTGATGTGTATGCATTTGGGGTGTTATTGCTGGAACTCCTCACTGGAAAAGAGGTTGCTGCTATATTGGCAGAAGATAATAAGAATTTGTCACATATTTTATGTGACATGGTTGGTGAGAAAAATGAGCAAGAGAGGGTGAAGGAGTTTATGGATCCTTCTTTGAAAGGAAATTATCCTTTAGAACTAGCTATGTTTGTAGTTGGAATGATTGATGATTGCATAGAGAAAGATCCAGAAAGTCGTCCACACATGTATGAGATTGTGCTATCTCTGTCTAGAATATTGAACTCTTCATTGAGTTGGGAAATGTCACTGAATATCTCAGCCTCTCAGGATACCATAGCATTATCAAGAGCTCTTGAAGTTACAGCAGCTGAAACATGA 1968 0.3841 MSHFPLIPSFIFTLLFCTFSLIEGQQPYIGLGTTACYRKGNSKSIRGYICNGANKSCQAYLTFRSQPLYSSVSKISALLSSDPSQLAEINSVSLNGTFETNKLVIVPVKCSCASEYYQANTSYVVQNADTPFLIASNTFEGLSTCQALQNENHNPWNMFQGRELLVPLRCACPTKNQTKKGVKYLLSYLVKGGDFVSLVSEKFGVKTETTLEANNLTMTNATIQPFTTLLVPLHDKPSNSQTVSSAPPPSLPSSSTTDKSSNKKWVYAVSIAAGVGVIVLVLILCAISFYIHHRKMKNKKDHAAVSESFDAIESSQGRQREEESKQLSEIISGIAQSFKVYAFEELQHATDNFNPSYWIKGSVFHGVINGDLAAIKKVEGNVLKEIELLNKVNHANVIRLSGVSLNEGHWYLVYEYATNGALSEWIYFNNNMNGKFLSWTKRIQIAFDVATGLDYLHSFTSPPHIHKDLKSSNILLDHDLRAKVSNLRLARSVEVQEGQQLPLTRHIIGTRGYMAPEYLENGLVSTKLDVYAFGVLLLELLTGKEVAAILAEDNKNLSHILCDMVGEKNEQERVKEFMDPSLKGNYPLELAMFVVGMIDDCIEKDPESRPHMYEIVLSLSRILNSSLSWEMSLNISASQDTIALSRALEVTAAET* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0269 655 Pfam LysM domain 188 232 IPR018392 -
Lan17g0269 655 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 10 634 - -
Lan17g0269 655 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 634 - -
Lan17g0269 655 ProSiteProfiles Protein kinase domain profile. 267 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0269 655 Pfam Protein kinase domain 376 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0269 655 CDD LysM 187 231 IPR018392 -
Lan17g0269 655 SUPERFAMILY Protein kinase-like (PK-like) 336 619 IPR011009 -
Lan17g0269 655 ProSiteProfiles LysM domain profile. 186 231 IPR018392 -
Lan17g0269 655 MobiDBLite consensus disorder prediction 237 260 - -
Lan17g0269 655 Gene3D Phosphorylase Kinase; domain 1 321 416 - -
Lan17g0269 655 Gene3D Transferase(Phosphotransferase) domain 1 418 640 - -
Lan17g0269 655 SMART serkin_6 358 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0269 655 Gene3D LysM domain 173 246 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0269 Lan-Chr17 1850659 1852916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0269 10 632 Receptor kinase-like Gene Family AT2G23770 42.970 2.05e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lan17g0269 Pkinase 5.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0269 - - gmx:100815842 860.522