Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0260 ATGGCACAACAAATTCAACAGCCCTCGGTATCAGAGCTCTTTCAACTCTCACTCACGTGCTCCTCAAAGAACACTGGACAAGATACAAGTGGTGCAGATGGTGCTGTTTTTGATGATGGTTTTGTCTTTAACATTGATCCTACCTTGCTATTGGACCGTCATAAATTATCCATTGACCACATCATCGGAGAAGGATCTCACTCCATTGTGTATGATGGAAGGTATGAATTCCATCCTGTGGCTATTAAGGCAATTCTCCCTGGTAGAACGAAGGATGCTTCACCTGATTGTAAGGCCAGATTTCAGCGAGAAGTCAACTTGTTATCAAAAGTCAAACATAAAAATATTGTCAAGTTTCTTGGCGCTTCTGTGGAGCCAACGATGGTGATAGTAACAGAACTATTGGAAGGTGGTTCACTTCTGAAAAATTTGAAGAGAATCTATCCTATGACTCTGGATTATGAGCAATGTCTAAGTTTTGCTCTGGAAATTTCTCAAGCTATGGAACATTTGCATGCAAAAGGATTCATTCACCGTGATCTGAAGCCTAGTAATTTACTTCTGACAAAAGATAAGAAGCATGTTAAAGTTGCTGATTTTGGGATAGCTAGAGAGGAGATGTGTGATGGAATGACTTCTGAGGCTGGTACTTACAGATATATGGCTCCTGAGTTATTCAGCAAAAGTCCACTTCGAAAGGGAGCAAAGAAATGCTATGATCGTAAGGCAGATGTTTACAGCTTTGCAATGGTTCTATGGTCATTGGTAAAAAACGAAACTCCATTCAAAGATAGGAAAGATTTGATGGCAGCATATGCTGCAGCAAATAATATGAGGCCTAGTTTGGATGAGTTTCCAGGGTGTCTAGTTCCCCTGGTGAAGTCTTGTTGGGAAGAAGACCCAAAGCTCCGACCAGAATTCAAAGAGATCACAACCACTCTAACAACTCTGCTCCGAGTTTGCCGCTCGACAGGGACAATTGCACTTACCAGAATAGCTGAGAGTGATGAAGAATTGGAAAGCAACACGGACGGACAAAGCTCAAAGGCAAAGGGCCCAACGTCCCAACAGTCAATGGAAAACATTTCTAATCGTAGGACTATAAAACCCAATGGCTTGATAGATGTTAAGGGCGAGTCTCTGTCTCAGCGCAAAACAAAGACCCCAAAATGGAATAATATCAAGCTCAAATGTCTCTCTTTCTTCAAACTTTGCTTTGGCATTTGA 1227 0.4165 MAQQIQQPSVSELFQLSLTCSSKNTGQDTSGADGAVFDDGFVFNIDPTLLLDRHKLSIDHIIGEGSHSIVYDGRYEFHPVAIKAILPGRTKDASPDCKARFQREVNLLSKVKHKNIVKFLGASVEPTMVIVTELLEGGSLLKNLKRIYPMTLDYEQCLSFALEISQAMEHLHAKGFIHRDLKPSNLLLTKDKKHVKVADFGIAREEMCDGMTSEAGTYRYMAPELFSKSPLRKGAKKCYDRKADVYSFAMVLWSLVKNETPFKDRKDLMAAYAAANNMRPSLDEFPGCLVPLVKSCWEEDPKLRPEFKEITTTLTTLLRVCRSTGTIALTRIAESDEELESNTDGQSSKAKGPTSQQSMENISNRRTIKPNGLIDVKGESLSQRKTKTPKWNNIKLKCLSFFKLCFGI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0260 408 SUPERFAMILY Protein kinase-like (PK-like) 49 330 IPR011009 -
Lan17g0260 408 PRINTS Tyrosine kinase catalytic domain signature 132 145 IPR001245 GO:0004672|GO:0006468
Lan17g0260 408 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672|GO:0006468
Lan17g0260 408 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Lan17g0260 408 PRINTS Tyrosine kinase catalytic domain signature 285 307 IPR001245 GO:0004672|GO:0006468
Lan17g0260 408 MobiDBLite consensus disorder prediction 345 368 - -
Lan17g0260 408 CDD STKc_MAP3K-like 62 310 - -
Lan17g0260 408 Pfam Protein tyrosine and serine/threonine kinase 57 314 IPR001245 GO:0004672|GO:0006468
Lan17g0260 408 PANTHER PROTEIN KINASE ATN1-LIKE PROTEIN-RELATED 14 350 - -
Lan17g0260 408 Gene3D Phosphorylase Kinase; domain 1 46 136 - -
Lan17g0260 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Lan17g0260 408 MobiDBLite consensus disorder prediction 335 369 - -
Lan17g0260 408 Gene3D Transferase(Phosphotransferase) domain 1 137 363 - -
Lan17g0260 408 ProSitePatterns Protein kinases ATP-binding region signature. 62 83 IPR017441 GO:0005524
Lan17g0260 408 PANTHER SERINE-THREONINE PROTEIN KINASE 14 350 - -
Lan17g0260 408 ProSiteProfiles Protein kinase domain profile. 56 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0260 408 SMART serkin_6 56 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0260 Lan-Chr17 1775511 1780083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0260 38 352 MAP Kinase Kinase Kinase AT5G66710 50.633 3.04e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan17g0260 PK_Tyr_Ser-Thr 2.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0260 - K04427 pvu:PHAVU_003G251900g 388.267