Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0259 ATGAGAGTTCCCGTTTCCTCAACCCCACAGGCCAACCCAAAACCCACCAACGCAGCCCGCACCGTAGCCCTCAACGCCTCTCCCAACCACAACAACAATAACAACAATCAAGTCTTGTGCTACGAGCCCACGTCTGTCCTTGACCTGTGCCGGAGCCCGAGTCCCGGCACGGGCCAAGAAAAGCCCACTGACCACTCTATTCCTGTCTCCAACTCCCAAGAGAGCCTGGAACTGGACGAACATGTGTTGCATAATTTGGATTGGGATTCAATCATGAAGGACTTGGGATTACAAGATGACTCAACCGCACCCGTTTTGAAGACTATGCTCCATCCCAACCCATGTGATCTTCCTGAATTCCCACCACCCTTTGAAAACGCCACCGAATTCACCACCCTCTCTGACATGTACTCAAATCAAAACATGGGTTACAACTTCATAACCAACACCAACACCAACACCATGGACCATTTGGTTCATGAGTCCTACACCCAAAACAATATCAACAACGGCTTCGATTTCATTGAAGAGCTTATTCGTGCAGCCGATTGCTTCGACAACAACCAGGCCCACGTGGCACATGTGATATTGGAGCGGCTCAATCAACGGCTACGATCTCCTGTAGGAAAACCACTCCACCGAGCAGCGTTTTACTTCAAAGAAGCGCTTCAGTCCCTTCTCTCTGGTTCGAACCGAACTCCGAGGCTTTCATCGTTGGTGGAAATCGTTCATAGCATCAAAACCTTCAAGGCTTTCTCTGGAATCTCCCCGATTCCAATGTTCTCCATCTTCACCACCAACCAAGCACTCTTGGAAGCACTTCACCCTTCCTCTTTCATGCACGTCATCGATTTCGATATTGGTTTAGGGATTCAATACGCTTCTCTCATGATGGAGATCGCAGAAAAGCTTGATTCGTCTAAACTAAACTCACCTCCGATGCTTAGAATCACCGCCGTCGTTCCTGAAGAATACGCGGTGGAGAGCCAATTGATTCGTGAGAATCTGAGCCAGTTCGCTCACGAACTCAGGATCCGTCTCCAGGTTGATTTCGTTCTGCTGCGAACCTTCGAGACGCTTTCATTTAAGGCGGTTAAATTTGTCGACGGAGAGAGGACTGCTGTGCTGTTGTCTCCGGCGATATTCCGTCGTCTCGGTTCAAACAACACCGCCGCGTTTTTAGCGGATGTCCGGAGAGTGTCACCCAGCGTGGTGCTCTTTGTGGACGGCGAGGGGTGGACGGAGGCGGCGGCGGCGACTTCATTTCGGCGTGATGTGGTGAGCAGTCTGGAGTTCTACTCGATGATGCTGGAGTCGCTGGATGCCTCCGTGGCAGGAGGAGGAGGTGGTGGGGATTGGGTGAGGAGAATTGAGATGTTGCTGCTGCGTCCTAAGATATTAGCGGCGGTGGAGGGCGCCGGGAGGCGGGTTCCACCGTGGAGGGAAGCTTTTTACGGCGCGGGAATGAGGCCTGTTCAGTTAAGTCAGTTCGCGGATTTTCAAGCAGAGTGTTTGTTGGCCAAGGTACAAATCAGAGGCTTCCACGTGGCAAAACGCCATGCTGAGTTGGTGCTTTGCTGGCAGGATAGGGCCATGGTTGCCACGTCAGCTTGGCGTTGTTAG 1623 0.5194 MRVPVSSTPQANPKPTNAARTVALNASPNHNNNNNNQVLCYEPTSVLDLCRSPSPGTGQEKPTDHSIPVSNSQESLELDEHVLHNLDWDSIMKDLGLQDDSTAPVLKTMLHPNPCDLPEFPPPFENATEFTTLSDMYSNQNMGYNFITNTNTNTMDHLVHESYTQNNINNGFDFIEELIRAADCFDNNQAHVAHVILERLNQRLRSPVGKPLHRAAFYFKEALQSLLSGSNRTPRLSSLVEIVHSIKTFKAFSGISPIPMFSIFTTNQALLEALHPSSFMHVIDFDIGLGIQYASLMMEIAEKLDSSKLNSPPMLRITAVVPEEYAVESQLIRENLSQFAHELRIRLQVDFVLLRTFETLSFKAVKFVDGERTAVLLSPAIFRRLGSNNTAAFLADVRRVSPSVVLFVDGEGWTEAAAATSFRRDVVSSLEFYSMMLESLDASVAGGGGGGDWVRRIEMLLLRPKILAAVEGAGRRVPPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRHAELVLCWQDRAMVATSAWRC* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0259 540 PANTHER SCARECROW-LIKE PROTEIN 15 7 539 - -
Lan17g0259 540 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 539 IPR005202 -
Lan17g0259 540 ProSiteProfiles GRAS family profile. 165 539 IPR005202 -
Lan17g0259 540 MobiDBLite consensus disorder prediction 51 71 - -
Lan17g0259 540 Pfam GRAS domain family 175 539 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0259 Lan-Chr17 1772647 1774881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0259 76 539 GRAS Transcription Factor Family AT4G36710 56.057 1.73e-174 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan17g0259 GRAS 2.4e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0259 - - gmx:100807470 739.569