Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0247 ATGTCTGTCTCAAACTTAACTTTATGTTCTCTTTCTTCTTTCATTCTAGCTTTTCTTCTCATCTTCATTCTCTTCAAAAGAAAGCAAACCAAACCCAAGCTTAACCTTCCCCCTGGCAAAATGGGCTGGCCCTTTATTGGAGAAACCATTGGATACTTGAAACCTTACTCAGCTACTACAATAGGAGAATTCATGGACCAGCACATAGCAAGGTATGGTAAAATTTACAAGTCCAAACTGTTTGGAGAGCCAGCAATAGTGTCAGCAGATGCAGGGTTGAATAGGTTCATATTACAAAACGAAGGAAAATTGTTTGAGTGCAGCTATCCTAGAAGCATTGGTGGAATACTAGGAAAATGGTCTATGTTGGTCTTGGTTGGTGACATGCACAGGGACATGCGAACCATATCACTCAATTTTCTAAGCCATGCCAGGCTCAGAACACATATGATGAAAGACGTGGAGAAACATACCCTTTTGGTTTTAAGGTCTTGGAAAGAAAATTCTACATTCTCAGCTCAAGATGAAGCTAAGAAGTTCACCTTTAATTTGGTGGCAAAACATATCTTGAACTTGGATCCTGGGAATCTAGAGACAGAGCAACTAAGGAAAGAGTATGTTACATTCATGAAGGGAGTGGTATCAGTACCTTTGAATTTACCTGGAACTGCATACAGGAAGGCGTTAAAGTCTAGGTGCACAATACTGAAACTCATTGAGGGGAAAATGGAAGAAAGAGTAAAAAGAATCCAAGAGGGAAATGAAAGTTTGGAAGAGGAAGATCTTCTAAACTGGGTTTTGAAACATTCAAGTCTTTCAACTGAGCAAATTCTTGACTTGATTCTAAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTATCCATAGCTCTAGCTATTTACTTCTTACCTGGTTGCCCACAAGCTATGCAGCAGTTAAAGGAAGAGCACAGAGAAATCGCCAGAGCCAAGAAACAAGCAGGGAAAGTTGAACTGACTTGGGATGACTATAAAAAAATGGAATTTACTCACTGTGTTGTGAACGAGACACTTCGGTTAGGAAATGTTGTGAGGTTCCTTCATAGGAAGGCTATTAAAGATGTTCGATACAAAGGTTATGATATTCCATGTGGATGGAAAGTCCTTCCAGTGATTGCAGCCGTGCATTTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAATGGTAGTCGTGGAAGTTGTCCAAGCATGAGCACAGTGAGCAATAACTTCTTACCGTTTGGGGGAGGACCACGATTATGTGCAGGATCAGAGTTAGCAAAGCTTGAAATGGCTGTTTTCATTCACCATTTAATCCTTAATTACCATTGGGAATTAACTGATACTGATGAAGCTTTTGCCTACCCTTTTGTCGATTTTCCCAAAGGCCTACCCATCAAAGTTAAAGCTCACTCTTTGCTTTGA 1467 0.4042 MSVSNLTLCSLSSFILAFLLIFILFKRKQTKPKLNLPPGKMGWPFIGETIGYLKPYSATTIGEFMDQHIARYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRTISLNFLSHARLRTHMMKDVEKHTLLVLRSWKENSTFSAQDEAKKFTFNLVAKHILNLDPGNLETEQLRKEYVTFMKGVVSVPLNLPGTAYRKALKSRCTILKLIEGKMEERVKRIQEGNESLEEEDLLNWVLKHSSLSTEQILDLILSLLFAGHETSSVSIALAIYFLPGCPQAMQQLKEEHREIARAKKQAGKVELTWDDYKKMEFTHCVVNETLRLGNVVRFLHRKAIKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNGSRGSCPSMSTVSNNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELTDTDEAFAYPFVDFPKGLPIKVKAHSLL* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0247 488 Coils Coil 240 260 - -
Lan17g0247 488 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 Coils Coil 306 333 - -
Lan17g0247 488 PANTHER CYTOCHROME P450 26 17 462 - -
Lan17g0247 488 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 PANTHER CYTOCHROME P450 90B1 17 462 - -
Lan17g0247 488 Pfam Cytochrome P450 37 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Lan17g0247 488 Gene3D Cytochrome P450 25 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0247 488 SUPERFAMILY Cytochrome P450 33 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0247 Lan-Chr17 1700497 1705901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0247 26 408 Cytochrome P450 AT3G50660 73.762 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0247 K09587 - gmx:100789515 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0247 17 1700497 1705901 Lan6g0168 6 1206916 1211204 LSH