Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0237 ATGGGAACTGATAGTGGTGAAGAAGTGGAGAGGTTACCAAATCCGCGCTCTTTTAAGGTACATAGTAAAATGTGCATAGAACTCATGAAATTAGTTGACAGAATCTCAAGTATATTTCCAGACATAGAGGCGGCACGGCCTCGATGCTCATCAGGAATACAGGCACTTTGTTTGCTGAACAATGCAATTGATAAAGCCAAACTACTTCTGCAACATTGCTCTGAATGCAGTAATCTCTACCTGGCTGTGACGGGGGATACAGTACTCTCAAGATGCCAAAAGACAAGAAAATTACTAAAGCAAAGCTTAATCCAGATTCAGGGAATGCTTCCAGTTCTGTTGGCTGCAGCGGTTTCTGGAATAATTGATGATCTTGACTGTGCAAAATTTGTCCTGGACTCTGCTGAAGAAGAGGCTGGAAGGGTTGTTAGAGAGTTGCTTCAGCAAGGTAATTCAGCCACAGATTCAGTTGACAGTTCTGAAGTTAAAGCTCTTAAGTTTGCGGCACCAAGACTTAATATTACATCTCCAAAGGCCATCTTAATAGAGAAACGATCTATTAAGAAGTTGCTAGATAAAATTGGACCAAATGACCCGAAAAAGAAAATGATTTTGAGATATCTTTTGTACCTACTGAAGAAGCATGGAAATCTCTTTGTGGAAGAACAAATGGAGAGGTCCTATTCTCCTAATGAAGAACCTATTGCAACCGATAACTCTATTCATGAATCTCTTCAAAGGCATCATGTTGAGTCAGAGTTCTTGAACTATGGTCAGTGTAGAACTCAAACCAGTGAGTTGGGTACAGTTACACCCCCGGAGGAATACAAATGCCCAATATCGTCAAGATTGATGTATGACCCTATTGTAATCGCTTCCGGGGAGACATATGAAAGGATGTGGATACAAAAGTGGTTCGATGAGGGTAATGATATGTGCCCAAAAACTAGAAAGAAGCTAGCTCATATGGGATTGACTCCTAACATTATCTTGAAGGAGTTAATATTGAAGTGGTGCAGGAACAATGGTGTCTCCCTCCCCGATCCAAGTAGGCAAGCAGAAAACTTTCATTCATGGGAAGCTTCCTCCACTTCCATTAAGAGTCTTGGAAGTTATTACAATGACTTGAACTTGCCAATGGATCATAGTAACATGTCACTTGGATCCTTGGATACGAGTTATAGTTCAGATGTCTCGCATGCTAATATTACTCATGGCTTAAATTTGATTAAGAATAGTGACAATTCTCAGAAAGATAGAGCTGATGCAGAGATACAGGATACAGATTTGATGCTTTTGTCTAAACTCCATGATCTTCAATGGGATTCTCAATGCAAGGTCATTGAAGATCTGAAAGACCATGTGAAAATCAATCACCAAGCCTTTTGTTCTGTATCACCTGAAGATTTCATTAAACCACTCGTCAAATTTCTGAGCAATGCATATGATCAACATGAGGTTAAAGCACTTAGAGCTGGAACTCAGCTGCTGTTGGAATTTGTGAACAACTGCAGAAATGGCCTGACAAATTTAAGCGAAGATGTGTTCAGCATGTTGACAAGTTTTCTTGATTCAGAAGTGATAGGAGAAGCTCTTGCCATAATGGAAGAGCTATCTGGATATTGGTCTAGTAAAGCTAAAATTGCAGCATCTAGCACACTCACTTCTGTTTTAAATGTACTTGATTCTGACGATAAAGACTTCCAACAACGAGCTATCAGAATCATGTACAATTTGTCGTTCAATGGAGAAGTCTGTCGCCACTTTTTATCTCTCAAGTGCATCCCAAAATTGCTGCCATTTTTTAAAGACATGTCCCTTTTGAGATACTGCATTAGCATATTGAAAAATCTTTGTGATACTAACGAGGGTAGGAATTCTGTTGCTGAAACAAAGGGATGCATATCTTCGGTTACTGAAATACTTGAGACAGGTAGCGATGAGGAACAAGAACATGCACTGGCTGTTCTAGTCTCTCTATGCTCTCAACGTGTGGATTATTGTAAGCTGGTTATGGATAGTGATATTATCCTTCCTCTTGCCTATATCTCCAAGAATGGAAATGATAAAGGAAAAGCAATTGCGATGGAACTGCTACGTCTTTTGAGAGACATTGATTATGTTGAGAATGAAGATTGCCTTGAACCAAATCTCAACACCCCTCAAGATTCCAACAATCACCCTCCTCAAGAAAAGAAAACATCAAAAGGGGCCTCATTCATGAAGAAACTATCATTGTTCTCAAAATCCAGTTCACATGCATCAAAATCAAAGAGATGA 2280 0.3956 MGTDSGEEVERLPNPRSFKVHSKMCIELMKLVDRISSIFPDIEAARPRCSSGIQALCLLNNAIDKAKLLLQHCSECSNLYLAVTGDTVLSRCQKTRKLLKQSLIQIQGMLPVLLAAAVSGIIDDLDCAKFVLDSAEEEAGRVVRELLQQGNSATDSVDSSEVKALKFAAPRLNITSPKAILIEKRSIKKLLDKIGPNDPKKKMILRYLLYLLKKHGNLFVEEQMERSYSPNEEPIATDNSIHESLQRHHVESEFLNYGQCRTQTSELGTVTPPEEYKCPISSRLMYDPIVIASGETYERMWIQKWFDEGNDMCPKTRKKLAHMGLTPNIILKELILKWCRNNGVSLPDPSRQAENFHSWEASSTSIKSLGSYYNDLNLPMDHSNMSLGSLDTSYSSDVSHANITHGLNLIKNSDNSQKDRADAEIQDTDLMLLSKLHDLQWDSQCKVIEDLKDHVKINHQAFCSVSPEDFIKPLVKFLSNAYDQHEVKALRAGTQLLLEFVNNCRNGLTNLSEDVFSMLTSFLDSEVIGEALAIMEELSGYWSSKAKIAASSTLTSVLNVLDSDDKDFQQRAIRIMYNLSFNGEVCRHFLSLKCIPKLLPFFKDMSLLRYCISILKNLCDTNEGRNSVAETKGCISSVTEILETGSDEEQEHALAVLVSLCSQRVDYCKLVMDSDIILPLAYISKNGNDKGKAIAMELLRLLRDIDYVENEDCLEPNLNTPQDSNNHPPQEKKTSKGASFMKKLSLFSKSSSHASKSKR* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0237 759 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 345 IPR013083 -
Lan17g0237 759 SMART Ubox_2 275 338 IPR003613 GO:0004842|GO:0016567
Lan17g0237 759 SUPERFAMILY ARM repeat 432 702 IPR016024 -
Lan17g0237 759 MobiDBLite consensus disorder prediction 714 737 - -
Lan17g0237 759 SUPERFAMILY RING/U-box 262 349 - -
Lan17g0237 759 PANTHER U BOX DOMAIN-CONTAINING 2 740 - -
Lan17g0237 759 MobiDBLite consensus disorder prediction 715 733 - -
Lan17g0237 759 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 2 740 - -
Lan17g0237 759 CDD RING-Ubox_PUB 276 318 IPR045210 -
Lan17g0237 759 Pfam U-box domain 273 342 IPR003613 GO:0004842|GO:0016567
Lan17g0237 759 Pfam Kinesin-associated protein (KAP) 467 659 - -
Lan17g0237 759 Gene3D - 429 716 IPR011989 -
Lan17g0237 759 ProSiteProfiles U-box domain profile. 271 345 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0237 Lan-Chr17 1607850 1613045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0237 9 712 U-box Gene Family AT4G36550 37.989 8.19e-151 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0237 - - gmx:100791627 1019.22