Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0221 ATGGCGGGTATATTCTCACTAGGCGGTGGTAGTGGTGGTGGTGGTGGTGGTGGCGGAGGGAGAGGAAACAACACCAACAACAACCAAGAAAATCAACAGCAAACCACAGATTTCTCTCCTCAACAAGAACCCTTATTTTGGTATAACAAGAGTGTGGAAGATGTTCGAGGTTTGGAGTTATGGCAGCACCACCAACAACCTCAAATCCCTCAAGTTAGACCTATTTTCCACCAAGATCTTTACTCCTTAGGTGTAGGACCTAGCAGAGGTTCCGATGCGGTGGCGAGCTCCGGTAGCGGAGGAGGGATTAGTTGTCAGGATTGTGGGAACCAAGCGAAGAAAGATTGCCCTCACATGAGGTGTAGAACTTGTTGCAAAAGCCGTGGCTATGATTGCCAAACCCATGTTAAGAGCACTTGGGTTCCTGCTTCTAAGCGTCGCGAAAGACTTCAACAACAACAGCAACAACAGCATCAGCTACACTCAGAGAGAGACCATAACCCCACTACTTCTCGTTTGCGTTCTAACCCTACAACCTCACCCTCAGGGTTAGAGCATACAAATTTTCCTGCTATGGTGAGTTCTCCAGCTGAGTTCAGATGTGTAAGAGTTAGTTCAATGGAAGACAGTGAGGAACAATATGCTTATCAAACAGCTGTTAACATTGGAGGGCATGTGTTCAAAGGAATTCTCTATGACCAAGGTCCAGATCATAGCACTAGTAGTTACACCGGTGGTGAAAGCTCCTCCACCCGTGTACTTGGCAGTGGCGGAGCTCAGTCTTCGAACCTCATTGCCGCCGCTACTACCACCGGGGCACTTGTGGATCCTTCTTTCTTGTATCCGCCTCAACTTAACACATTCATGCCTCCTTGTGGTACGCAATTCTTCCCTCACCAAAGATCATGA 909 0.4796 MAGIFSLGGGSGGGGGGGGGRGNNTNNNQENQQQTTDFSPQQEPLFWYNKSVEDVRGLELWQHHQQPQIPQVRPIFHQDLYSLGVGPSRGSDAVASSGSGGGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHVKSTWVPASKRRERLQQQQQQQHQLHSERDHNPTTSRLRSNPTTSPSGLEHTNFPAMVSSPAEFRCVRVSSMEDSEEQYAYQTAVNIGGHVFKGILYDQGPDHSTSSYTGGESSSTRVLGSGGAQSSNLIAAATTTGALVDPSFLYPPQLNTFMPPCGTQFFPHQRS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0221 302 MobiDBLite consensus disorder prediction 143 189 - -
Lan17g0221 302 MobiDBLite consensus disorder prediction 1 41 - -
Lan17g0221 302 MobiDBLite consensus disorder prediction 20 41 - -
Lan17g0221 302 MobiDBLite consensus disorder prediction 171 189 - -
Lan17g0221 302 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 189 236 IPR006511 -
Lan17g0221 302 Pfam Domain of unknown function (DUF702) 102 237 - -
Lan17g0221 302 PANTHER PROTEIN SHORT INTERNODES 1 300 - -
Lan17g0221 302 MobiDBLite consensus disorder prediction 143 158 - -
Lan17g0221 302 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 300 IPR007818 GO:0003700|GO:0006355
Lan17g0221 302 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 104 146 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0221 Lan-Chr17 1514214 1516963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0221 1 302 C2H2 Transcription Factor Family AT1G75520 41.144 1.86e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lan17g0221 DUF702 1.4e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0221 - - lang:109331278 550.051