Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0220 ATGATGGTGCCTGAACGAGCTAAGCTACACATAGCCTTAACGTTTTTACAATTTTGTCATGCAGGAAATCATATATTTCTGAGAATTGCACTTAATACAGGCATAAGCAAATTTGTTCTTCCTGTCTATAGAAACATTACTGCTCTTGTTCTTCTTGGTCCCCTTGCATATTTTTCAGAGAAAATAACTTTGAAAGAAGGATTCTACCTTGTGGGTTTAGAAAACACATCACCTACTTTTGCTTCTGCTATGCAGAATTCTGTTCCAGCCCTGACATTTCTTATGGCTGCATTACTAAGATATGAGAGCGTCTACTTGAATAGGATAGATGGTGTGGCTAAGGTTCTTGGAGTCATTGCTACTGTTGGAGGAGCTACAGTTATTACCCTTTACAAGGGACCTACAATTTATACTCCAAATTTATCATTACATGAGAAACAATTCTTGCCGGTATTGGGGGACGCCGAAGAGAAGAACTGGAACTTGGGTTGCATCTGTCTCTTTGGCCACTGTTTAAGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTCTTGAAAAAATACCCAGCCTCACTCACAGTTACTGCCTTTACTTGCTTCTTTGGTGTTGTGCAGTTTATGACAATTGCAGCTTTTTTTGTGAAGGATTCCAAAGCCTGGCTGCTCAATTCTACTAGTGAGATCTACAGTATTTTGTACTCGGGAGTAGTGATTTCAGCACTGGCAGCAGCAATACAGATATGGACTATTAGCAAGGGAGGGCCAGTGTTTGCTTCAATATATCTACCCTTACAGACATTAATTGTAGCCTTGATGGCACCTATTTTTTTGGGTGAAAAATTCTTCTTGGGAGGGGTTATTGGAGCTTTCTTAATTGTATCAGGCTTATACCTTGTTGTCTGGGGAAAAAGTGAAGAAACCAAGTTTGCTAAAGAGGTCATAGTCCTCATTGACCCTAAGAATCATGCAGAAGAAAAATGTAGCAGTTCTTCCCTCATCTATCCATTGATTCCTACACAGAAATCTTAG 1029 0.3984 MMVPERAKLHIALTFLQFCHAGNHIFLRIALNTGISKFVLPVYRNITALVLLGPLAYFSEKITLKEGFYLVGLENTSPTFASAMQNSVPALTFLMAALLRYESVYLNRIDGVAKVLGVIATVGGATVITLYKGPTIYTPNLSLHEKQFLPVLGDAEEKNWNLGCICLFGHCLSWSGWIVMQAFVLKKYPASLTVTAFTCFFGVVQFMTIAAFFVKDSKAWLLNSTSEIYSILYSGVVISALAAAIQIWTISKGGPVFASIYLPLQTLIVALMAPIFLGEKFFLGGVIGAFLIVSGLYLVVWGKSEETKFAKEVIVLIDPKNHAEEKCSSSSLIYPLIPTQKS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0220 342 PANTHER WAT1-RELATED PROTEIN 62 313 IPR030184 GO:0016021|GO:0022857
Lan17g0220 342 PANTHER WAT1-RELATED PROTEIN 6 61 IPR030184 GO:0016021|GO:0022857
Lan17g0220 342 Pfam EamA-like transporter family 162 300 IPR000620 GO:0016020|GO:0016021
Lan17g0220 342 PANTHER WAT1-RELATED PROTEIN 6 61 - -
Lan17g0220 342 PANTHER WAT1-RELATED PROTEIN 62 313 - -
Lan17g0220 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 211 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0220 Lan-Chr17 1504774 1507247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0220 3 330 Nodulin-like Gene Family AT1G75500 56.742 2.57e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0220 - - gmx:100790386 525.013