Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0210 ATGGATTCCCTTCTTAAAACCCAAACCATATACAACGTTGAACTAGAACCACTCCACATGGCAGTGTTGCTGTTCATTGTCCCACTCATCTTGCTCCTAGTGTTAGGTTTACTCTCTCGAATTCGTAGAAGGCTACCATATCCACCAGGACCAAAAGGGTTACCCATCATAGGTAACATGCTAATGATGGATCAGTTAACACACCGTGGCTTGGCCAACATAGCCAAGAAATACGGTGGCATCTTCCACCTTCGCATGGGGTTCCTTCACATGGTTACTATTTCAGATGCAGAAGCAGCACGTCAAGTTCTCCAAGTCCAAGATAACATATTTTCTAACCGACCAGCTACAATAGCCATAAGCTACCTTACTTATGACCGTGCAGACATGGCTTTCGCTCATTATGGTCCCTTTTGGCGTCAGATGCGCAAGCTATGTGTTATGAAGCTCTTCAGTCGCAAGCGTGCTGAGTCTTGGCAATCAGTAAGGGACGAAGTTGATACAGTTGTGAGAACCGTTGTGGCCAACACTGGCAATCCAGTGAATATAGGTGAGTTAGTGTTCAACCTCACAAAAAATATAATCTACCGATCAGCTTTTGGGTCAAGCTCGCAAGAAGGGCAAGATGAGTTCATAGGGATACTTCAAGAATTCTCTAAATTGTTTGGAGCTTTCAACATCGCTGATTTCATACCCTATCTTGGAGGAATTGATCCTCAAGGCCTCAGCACTAGGCTAGTGAAGGCACGTGGATCATTGGACAGCTTCATAGACAAGATCGTAGATGAACATATAGTGAAGAAGAAGAATAAGAGTGAGAATGTTTGTGGTGGGGATGAAGAAACTGACATGGTGGATGAGTTGTTAGCTTTCTATAGTGAAGAAGCTGGAGTAAATCAATTCGATGGTCCACCTCACACTTCTATCAACCTCACTAAGGATAACATCAAAGCCATCATCATGGATGTGATGTTCGGAGGAACAGAGACAGTGGCATCAGCAATAGAATGGACCATGGCAGAGTTAATGAGAAGCCCACATGATTTGAAAATAGTCCAACAAGAACTCACTGATGTTGTGGGCTTAGCCCGACGGGTCGAAGAGCCTGACTTCGACAAACTCACTTACCTCAAATGTGTTATCAAAGAGACCCTCCGCCTCCACCCACCCATCCCCCTCCTCCTCCATGAGACGGCGGAGGACACTGCCGTCAACGGCTACTTCGTCCCCAAAAAATCACGCGTCATGATCAACGCGTGGGCTATTGGAAGAGACAAGAATTGTTGGGACGAGCCCGAAGTTTTTAAACCCGCACGGTTCTTAAAATTGGGAGTGGCAGATTTTAAAGGTAGCAACTTTGAGTTCATTCCTTTCGGGTCGGGTCGTAGATCCTGCCCTGGAATGCAGTTGGGGCTGTACGCGCTTGAATCGGCGGTGGCTCACCTTCTTCATTGCTTCACGTGGGAGTTACCAGATGGAATGAAAGCAATTGAGATGGATATGAGTGACGTGTTCGGACTCACTGCTCCTTTGGCGAGTCGACTCATTGCTGTACCCACTAAGCGCGTGGTGTGTCCTCTATTCTAG 1587 0.4644 MDSLLKTQTIYNVELEPLHMAVLLFIVPLILLLVLGLLSRIRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANIAKKYGGIFHLRMGFLHMVTISDAEAARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDTVVRTVVANTGNPVNIGELVFNLTKNIIYRSAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFIPYLGGIDPQGLSTRLVKARGSLDSFIDKIVDEHIVKKKNKSENVCGGDEETDMVDELLAFYSEEAGVNQFDGPPHTSINLTKDNIKAIIMDVMFGGTETVASAIEWTMAELMRSPHDLKIVQQELTDVVGLARRVEEPDFDKLTYLKCVIKETLRLHPPIPLLLHETAEDTAVNGYFVPKKSRVMINAWAIGRDKNCWDEPEVFKPARFLKLGVADFKGSNFEFIPFGSGRRSCPGMQLGLYALESAVAHLLHCFTWELPDGMKAIEMDMSDVFGLTAPLASRLIAVPTKRVVCPLF* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0210 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Lan17g0210 528 Gene3D Cytochrome P450 40 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PANTHER CYTOCHROME P450 84A1-RELATED 18 528 - -
Lan17g0210 528 SUPERFAMILY Cytochrome P450 41 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 Pfam Cytochrome P450 48 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0210 528 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 18 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0210 Lan-Chr17 1428664 1431154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0210 55 527 Monolignol Biosynthesis Gene Families AT4G36220 74.630 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0210 K09755 - gmx:100783430 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0210 17 1428664 1431154 Lan18g1062 18 15757978 15761687 LSH