Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0205 ATGATGGAGTCGATGGAGTCATGTGTCCCACCCGGGTTTCGGTTCCACCCAACAGATGAGGAACTAGTTGGTTATTATCTCAGGAAGAAAGTAGCTTCTCAGAAGATTGACCTTGATGTTATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTAATAGAGAGATGCAGGATCGGGTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAGAAATATCCAACGGGAACAAGAACGAATAGAGCTACCATGGCAGGGTTCTGGAAAGCAACTGGGAGAGATAAGTCAGTGTATGATAAGACCAAATTGATAGGGATGAGGAAGACCCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGCCAGAAAACTGATTGGATCATGCATGAATATAGGCTTGAATCTGATGAGAATGGACCTCCACAGGAGGAAGGATGGGTTGTATGCAGAGCTTTCAAGAAAAAAATCACCAATGGCCAAAGTAAGAATATCCAAGGATGGGTTTCAAGCTCTTTCTACAACGAAGAAAGTGTAGTAATCTCTATGGTGGACCCAGTTGATCTCATGTCAATTCAGCCTCAGAGCTTCTTAGCTCAAAGTTTAATGTGCAAACAAGAGATAGAAGCAGCAGAAAACTTGAGCTGCATGCATCCTAATAATGCTGAACAATTTGTACAGCTTCCTCAGCTAGAAAGCCCTTCTTTACCATTTGCAAAGAGGCCAAGCACAGTGTCCACCGAAGAAGATGGTCAAAACAAGACAAAGAAAGTAACTACTGATTGGAGAGATCTTGATAAATTTGTGGCTTCTCAACTGAGTCAAGAAAATCACAGGCATGAAACTGATCATGGAGTACTGTTGTCAAGCTTTGAAAATCATACAAACTCTGACATGGCATTGCTGCTTCTGCAGAATGGTAGGGATGATGAAGGGAACAAGTTAAACCCATTTTTAAATGCAAGCTCAGACTGTGATATTGGGATATGCGTATTTGAAAAATGA 1014 0.4142 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLIERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQEEGWVVCRAFKKKITNGQSKNIQGWVSSSFYNEESVVISMVDPVDLMSIQPQSFLAQSLMCKQEIEAAENLSCMHPNNAEQFVQLPQLESPSLPFAKRPSTVSTEEDGQNKTKKVTTDWRDLDKFVASQLSQENHRHETDHGVLLSSFENHTNSDMALLLLQNGRDDEGNKLNPFLNASSDCDIGICVFEK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0205 337 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 313 - -
Lan17g0205 337 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Lan17g0205 337 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 5 313 - -
Lan17g0205 337 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Lan17g0205 337 Gene3D NAC domain 18 161 IPR036093 GO:0003677|GO:0006355
Lan17g0205 337 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0205 Lan-Chr17 1349929 1354991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0205 2 336 NAC Transcription Factor Family AT2G18060 61.413 2.65e-154 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan17g0205 NAM 4.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0205 - - aprc:113869508 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0205 17 1349929 1354991 Lan18g1066 18 15811698 15816365 LSH