Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0204 ATGAAGCGTCAAAGGAAATCGAACATGGTTTCGTGGGCTCCTGGACCTAATCTTTGTCAGGTGAAATTGTTTTTATCTGATGATTGCCCTTCAAAAGTTGGCCAGAAATCTCAAGAAAATCTTCAAGCAAAGACATTGACAATGTTGCCTTCGAGTACAAATGAATATAATGATTTACCTCCTGGGTTTGAAGGCAATTATTTTCTGATCCAATCAAAGGCCAAGTTCTCTCACATTCCTCAGATTAAATGGGAGTGTGCTCCCCAGTTCACTCCTGATCCTGAGTGGCGTCTTGCAGCTGGTGAACATAGTAGAGAGAAAGTAGATCAGAAGCATCGAGAAATGAGAGTGCTTGAAGCAGTTTATCCCCGCCTTTCTGCCATTCCTCCTAGCCCTTCTGTCTCTTCTGAAGTGGAACAGGAAGATTATGATGATAATCTCACTCCTCTCATCCCTATCACTGAACCTGTTGAGGAAGAGGATTCTGTGGATATTACACCTGAAATGGCATTAACCCAACCCTTTGACACTACCACTAATTTGCAGTCACAAGATTTAACTGCAGCTGTCATTGCAGCCATCTCGAGGAGCAATGATCAAGGAAACTTGATTGATATGGATCTACTTGCTAAAATATTTAATGATCCAATATTGATTGAGAAATTGATTAAAGAACGTGGAAGAACTGCAGCAGCAACTCCTGTTAATGCCTCCTCAAATAGTGTGAGTATACCCACTTCTGGATTGGAACCTGCTACATCAGTTCCAGTGTCAAAACCTACTACACCTCCAAGTACAATGGCTTTACCTTCTATGTCTAACCAAGCAACGAAATCGGCTTCATTCTTGACGCCGGCACCTGGTAAGCCTGCCGATCCATCTGTTTCAATTTTCACATCTGCACTTCACAATCCTGTAGGTAAATCAGCAAGTCCATCATTGACACTACCTAGACCTCTTCCTCCTTCTCCACCCGCACCTGCACCTCTTAATCATAAACATGTCAACACAAATAATCACCACATGACTGATGGGGTGCTGCACAATTTAAATACCCATCCTCCTCAACAAGATTTACTTGTATCATATGGGCCACGGCGATCAGAATCATTGGGCACATTGCTGCCGTTTCCTTCTACTACAATGAATGCGCATGCAGGCGCAAACCAGGTAGGATCTACTGCTAGTTCTGCGGCATATCAACCAAGTATCAGTTCAGCCTTTGCAGTAAAGAAAGATGCCAACTATTATAAGAACCTTATTAAGCAACATGGTGCAGATAAGAAAGATAAGCAGGACTCACAAATTGGTACCCATCATAATAATTTTGAAGATTCTAAAACGGTTCAAAACTTTAAAATGGGGGAAATGATATCCAAAATCCAGAAGCCTTGCATATATTTTAAAAGCCCAAGGGGATGTAGAAATGGTTTTAACTGTCCTTATCAGCATGATATGTCAGTTCAATTGAGAGTTAGTAATGTCCTAGAGTCCCCAAATCAAAAAAGATTCAAACTTGGACCTGAAATTAACTGGAGGGTATAA 1545 0.4136 MKRQRKSNMVSWAPGPNLCQVKLFLSDDCPSKVGQKSQENLQAKTLTMLPSSTNEYNDLPPGFEGNYFLIQSKAKFSHIPQIKWECAPQFTPDPEWRLAAGEHSREKVDQKHREMRVLEAVYPRLSAIPPSPSVSSEVEQEDYDDNLTPLIPITEPVEEEDSVDITPEMALTQPFDTTTNLQSQDLTAAVIAAISRSNDQGNLIDMDLLAKIFNDPILIEKLIKERGRTAAATPVNASSNSVSIPTSGLEPATSVPVSKPTTPPSTMALPSMSNQATKSASFLTPAPGKPADPSVSIFTSALHNPVGKSASPSLTLPRPLPPSPPAPAPLNHKHVNTNNHHMTDGVLHNLNTHPPQQDLLVSYGPRRSESLGTLLPFPSTTMNAHAGANQVGSTASSAAYQPSISSAFAVKKDANYYKNLIKQHGADKKDKQDSQIGTHHNNFEDSKTVQNFKMGEMISKIQKPCIYFKSPRGCRNGFNCPYQHDMSVQLRVSNVLESPNQKRFKLGPEINWRV* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0204 514 MobiDBLite consensus disorder prediction 424 440 - -
Lan17g0204 514 MobiDBLite consensus disorder prediction 232 282 - -
Lan17g0204 514 MobiDBLite consensus disorder prediction 230 328 - -
Lan17g0204 514 MobiDBLite consensus disorder prediction 297 311 - -
Lan17g0204 514 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 506 - -
Lan17g0204 514 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 506 - -
Lan17g0204 514 ProSiteProfiles Zinc finger C3H1-type profile. 459 487 IPR000571 GO:0046872
Lan17g0204 514 MobiDBLite consensus disorder prediction 424 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0204 Lan-Chr17 1337794 1343499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0204 81 222 Homeobox Transcription Factor Family AT4G02560 35.211 5.67e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan17g0204 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0204 - - lang:109333118 592.038