Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0194 ATGCTTTCCTCCCTATATTTTCCTTCATCTCTCTCTTCCGTCAATGTCTCCGGCAACGCCATGGCTCCTCCGCCGTGCCGCGTCAGATCTTCTCCTATGGTTGCCTTTGCCACAGCCACAGCCACCGCCACCGCAACATCTGCGGCTGATGCTCGCTCTACCTGGACGGATCAACCTAGGTCTTCTTCGTATGTGAACCCTAGCTGCATGTCCTCTGCATCGCTCTACGATATTCTAGGAATTCCGGCATCCGCCTCCAATCAGGAGATCAAAGCGGCGTACCGGCGATTGGCTAGGGTTTGCCACCCTGACGTGGCGGAGATCGGTCAGAAAACCTCGTCGGCGGATGAGTTTATGCAGATTCATGCTGCGTACTCCACTCTATCAGATCCTGAAAAGCGCGCCAGCTATGATCGGAGTTTGTTTCGCAGTCGACAACGGCCGTTGTCGGCGGCGTCTGTGTTTTCAGGCTACACCGGTCGGAACTGGGAAACTGATCAGTGCTGGTAG 510 0.5529 MLSSLYFPSSLSSVNVSGNAMAPPPCRVRSSPMVAFATATATATATSAADARSTWTDQPRSSSYVNPSCMSSASLYDILGIPASASNQEIKAAYRRLARVCHPDVAEIGQKTSSADEFMQIHAAYSTLSDPEKRASYDRSLFRSRQRPLSAASVFSGYTGRNWETDQCW* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0194 169 CDD DnaJ 76 130 IPR001623 -
Lan17g0194 169 ProSiteProfiles dnaJ domain profile. 74 141 IPR001623 -
Lan17g0194 169 ProSitePatterns Nt-dnaJ domain signature. 118 137 IPR018253 -
Lan17g0194 169 PRINTS DnaJ domain signature 76 94 IPR001623 -
Lan17g0194 169 PRINTS DnaJ domain signature 94 109 IPR001623 -
Lan17g0194 169 PRINTS DnaJ domain signature 113 133 IPR001623 -
Lan17g0194 169 PRINTS DnaJ domain signature 133 152 IPR001623 -
Lan17g0194 169 Pfam DnaJ domain 75 138 IPR001623 -
Lan17g0194 169 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 169 - -
Lan17g0194 169 SMART dnaj_3 73 133 IPR001623 -
Lan17g0194 169 Gene3D DnaJ domain 60 156 IPR036869 -
Lan17g0194 169 SUPERFAMILY Chaperone J-domain 69 144 IPR036869 -
Lan17g0194 169 PANTHER - 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0194 Lan-Chr17 1252881 1253685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0194 76 138 C2H2 Transcription Factor Family AT1G74250 42.424 1.21e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0194 - - gmx:100800959 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0194 17 1252881 1253685 Lan6g0213 6 1607554 1608368 LSH