Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0181 ATGACGATGGAAGAGGTGTGGAAAGACATAAACCTTGCTTCCTTGAATGAACATAACACACGCTCATCCATGAGTACAAGGGGTTCCACTTTTGGAGGTGCAATGTTCCAAGATTTTCTTAGCATAGTCCCATCATCAAATACTTGTTCAAACATTTCTTCTTCAAATTCATGTTCACTTTACACTACAGCTCCACCAACTCCAGTTACTGCTCTCAGCCTTAGTTGTTCTCGTCCCAAGGTATCTTGTTATAGCACCACCACTACTACTACTACTCCTCCATTTGAGAGCTTGAATTGCACCGCTTCTTTGCCAAGTTTTGAGACCAAAGGGTTTACTGAACCACCAAGTCGCAACCGTGGGGAGAGAAAAAACAAGCGTATGATCAAAAACCGTGAATCTGCTGCACGTTCACGAGCCAGAAAGCAGGCTTATACAAAGGAACTGCAGCTTAAAGTTGAACGTTTGATGGAAGAAAATGCAAGGCTCAAGAGACAGCAACAACAGTCATATGAAGCCGCAGCCATTCAGCAAAAGAAGAAGAAGAAGAACACTCTATATCGAACATCTACTGCTCCATTTTGA 585 0.4274 MTMEEVWKDINLASLNEHNTRSSMSTRGSTFGGAMFQDFLSIVPSSNTCSNISSSNSCSLYTTAPPTPVTALSLSCSRPKVSCYSTTTTTTTPPFESLNCTASLPSFETKGFTEPPSRNRGERKNKRMIKNRESAARSRARKQAYTKELQLKVERLMEENARLKRQQQQSYEAAAIQQKKKKKNTLYRTSTAPF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0181 194 MobiDBLite consensus disorder prediction 109 144 - -
Lan17g0181 194 SUPERFAMILY Leucine zipper domain 123 170 IPR046347 GO:0003700|GO:0006355
Lan17g0181 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 121 166 IPR004827 GO:0003700|GO:0006355
Lan17g0181 194 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 194 IPR043452 GO:0003700|GO:0045893
Lan17g0181 194 SMART brlzneu 119 189 IPR004827 GO:0003700|GO:0006355
Lan17g0181 194 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 126 141 IPR004827 GO:0003700|GO:0006355
Lan17g0181 194 Gene3D - 121 179 - -
Lan17g0181 194 PANTHER PROTEIN FD-LIKE 2 194 - -
Lan17g0181 194 MobiDBLite consensus disorder prediction 115 144 - -
Lan17g0181 194 CDD bZIP_plant_BZIP46 123 175 - -
Lan17g0181 194 Pfam bZIP transcription factor 123 181 IPR004827 GO:0003700|GO:0006355
Lan17g0181 194 Coils Coil 146 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0181 Lan-Chr17 1161060 1162376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0181 2 194 bZIP Transcription Factor Family AT3G56850 33.186 2.15e-19 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan17g0181 bZIP_1 2.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0181 K14432 - vvi:100260902 145.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0181 17 1161060 1162376 Lan18g1085 18 15950851 15952504 LSH