Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0174 ATGACGGAGACTAACGGTAACGGTTTCATTTACCTCCACGGCGATCTTCACCTTCAAATCATCGAAGCTCGCCGGTTGCCGAACATGGACCTCATGTCGGAGCGTTTCCGTCGCTGCATCACCGCATGTGACACTATTAATATCCCCTCCTCCTCTGACTCCGCCTCCAAACACGACGGCGCCGATAGCCGTTCCCATCGCCATCGTCGGAAAATCATCACAAGCGACCCTTACGTCGCCGTCACGGTGCCACAGGCCACCGTGGCGCGCACGCGCGTGATAAAGAACGCGCAAAACCCTCGCTGGGACGAGACCTTCAACATTCCCTTAGCACACCCCGTAGAGTTTCTCGAGTTCCGCGTCAAAGACGACGACGTTTTCGGCGCACAGTCTATCGGAGCGGTTAAGATCCCGGCGAAGGATATCGCCTCCGGCAAGTTGATCTCCGGCTGGTTCCCGCTTCTCGGAGGGAACGATAAGCCTCCGAAGCCTGACACTGCAATTCGGATCGAAATGCAGTTCACAGCAGTTTCAGAAAATCCGTTGTACCATAACGGCATTGCGGCGGATCCGGAGCACCGGGGCGTGAGGCACACGTACTTTCCGGTGAGGAAGGGAAGCTCGGTGAGGCTTTATCAAGACGCGCAATGCTCCGATGGAATGTTAGAAGAGATTAAGCTTGAGAATGGGAATGTTTATAAGCAAGGGAAGTGTTGGGAAGATATATGTTATGCTATAAGTGAGGCTCATCATATGGTGTATCTTGTGGGTTGGTCAATTTACCATAAGATAAAGCTTGTTAGAGAACCAACTAGGCCTTTGCCAAGAGGTGGAGATTTAACACTTGGTGAATTGCTGAAGTATAAGTCTGAAGAAGGGGTTAGAGTTTTGTTGTTGGTTTGGGATGATAAGACTTCACATGACAAGTTATTCTTCAAATCTACTGGAGTAATGCAGACTCATGATGAGGAAACAAAGAAGTTTTTTAAACATTCTTCTGTTATGTGTGTTCTAGCTCCTCGGTACGCTAGCAGCAAGTTGAGCTTCTTGAAGCAACAGGTTGTTGGAACTGTCTTCACACACCACCAAAAATGTGTTATTGTGGACACCCAGGCTTCTGGCAATAACCGAAAGATAACTGCTTTTATAGGAGGTCTTGATCTATGTGATGGTCGCTATGACACACCTGAGCATCGACTTTTTCGTGATCTTGACACTGTATTTTTGGGTGATTTCCACAATCCTACATTTCCTGCTGGAACAAAGGTTCCGAGGCAACCATGGCATGATTTGCACTGCAGAATAGATGGACCTGCTGCATATGATGTTCTTCTTAATTTTGAGCAGCGATGGAGAAAATCAACTAAGTGGAGAGAGATTGCATTTATTTTCAAAAAAGTTTCTCATTGGCATGATGATGCTTTAATAAGAATTGGACGCATCTCCTGGATATTAAGTCCTTCCGTTCCTACTCCCACCTCAAGGAATACTTATACTATTGTTCCAGAGGATGACCCTTTAGTATGGGTTTCTAGTGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGATCCCTGAAAGGATTTCCTAAAGTTGTTGATGTTGCTCGGTCCCAGAATCTAATCTGTGCTAAAGATTTGGTCATAGACAAGAGCATTCAAACTGCATACATTCAAGCAATCAGATCTGCTCAGCATTTTATCTATATTGAAAACCAATACTTCATTGGATCATCATATGCATGGCCATCTTACAAAGATGCAGGGGCTGATAATCTCATTCCAATGGAATTGGCTTTGAAAATTGCTAGTAAAATCAAAGCGAAGGAGAGATTTGCTGTTTACATTGTTTTACCAATGTGGCCAGAAGGTGATCCAAAATCTGGGGCTATGCAAGAAATCCTCTTTTGGCAGAGCCAGACAATGCAGACCATGTATAATACAATTGCTAAAGAATTAAAATCAATGCAACTTACTGATGTGCACCCACAAGATTACCTCAACTTCTATTGCCTTGGTAATCGGGAAGAATTTAATGAAGAAAGCTCAAGCACAAATGGTTCACAGGTCTCTGGAGCATATAAATGTCGCCGATTTATGATTTATGTGCATGCGAAGGGGATGATAGTCGACGATGAGTATGTTATAGTGGGATCTGCTAATATAAACCAAAGATCTATGGCTGGCACCAAAGATACCGAGATAGCTATGGGTGCATATCAACCCCATTACACTTGGTCTGCGAAGAAAAGGCATCCATTTGGTCAGATTTATGGTTACAGAATGTCACTGTGGAGAGAGCATCTTGGCATGTTAGAAGAAACTTTTGAGGAACCAGAGAGATTGGAGTGTGTACGTAAAGTGAATGAAATTGCGGAAGATAATTGGAGAAGATACAGTTCTGAAGAATTTTCACTGCTGCAAGGACATATTCTTAAGTATCCTGTACAAGTAGATTCTGATGGCCAAATTAGCTCTTTACCTGATTGTGAAAATTTCCCAGATGCTGGTGGTAAGATACTGGGTGCTCAATCTCCAACAATTCCAGATATCCTAACAACATAA 2583 0.441 MTETNGNGFIYLHGDLHLQIIEARRLPNMDLMSERFRRCITACDTINIPSSSDSASKHDGADSRSHRHRRKIITSDPYVAVTVPQATVARTRVIKNAQNPRWDETFNIPLAHPVEFLEFRVKDDDVFGAQSIGAVKIPAKDIASGKLISGWFPLLGGNDKPPKPDTAIRIEMQFTAVSENPLYHNGIAADPEHRGVRHTYFPVRKGSSVRLYQDAQCSDGMLEEIKLENGNVYKQGKCWEDICYAISEAHHMVYLVGWSIYHKIKLVREPTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLFFKSTGVMQTHDEETKKFFKHSSVMCVLAPRYASSKLSFLKQQVVGTVFTHHQKCVIVDTQASGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVFLGDFHNPTFPAGTKVPRQPWHDLHCRIDGPAAYDVLLNFEQRWRKSTKWREIAFIFKKVSHWHDDALIRIGRISWILSPSVPTPTSRNTYTIVPEDDPLVWVSSEDDPENWHVQIFRSIDSGSLKGFPKVVDVARSQNLICAKDLVIDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIASKIKAKERFAVYIVLPMWPEGDPKSGAMQEILFWQSQTMQTMYNTIAKELKSMQLTDVHPQDYLNFYCLGNREEFNEESSSTNGSQVSGAYKCRRFMIYVHAKGMIVDDEYVIVGSANINQRSMAGTKDTEIAMGAYQPHYTWSAKKRHPFGQIYGYRMSLWREHLGMLEETFEEPERLECVRKVNEIAEDNWRRYSSEEFSLLQGHILKYPVQVDSDGQISSLPDCENFPDAGGKILGAQSPTIPDILTT* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0174 860 SMART C2_3c 15 151 IPR000008 -
Lan17g0174 860 SMART pld_4 705 732 IPR001736 GO:0003824
Lan17g0174 860 SMART pld_4 357 392 IPR001736 GO:0003824
Lan17g0174 860 PANTHER PHOSPHOLIPASE D 8 860 IPR015679 -
Lan17g0174 860 Gene3D C2 domain 12 183 IPR035892 -
Lan17g0174 860 PIRSF PLD_plant 1 860 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lan17g0174 860 Gene3D Endonuclease Chain A 222 472 - -
Lan17g0174 860 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 175 IPR035892 -
Lan17g0174 860 Pfam Phospholipase D C terminal 779 849 IPR024632 -
Lan17g0174 860 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 357 392 IPR001736 GO:0003824
Lan17g0174 860 SUPERFAMILY Phospholipase D/nuclease 559 790 - -
Lan17g0174 860 Gene3D Endonuclease Chain A 534 757 - -
Lan17g0174 860 ProSiteProfiles C2 domain profile. 1 152 IPR000008 -
Lan17g0174 860 Pfam Phospholipase D Active site motif 357 392 IPR001736 GO:0003824
Lan17g0174 860 CDD C2_plant_PLD 10 175 - -
Lan17g0174 860 Pfam C2 domain 14 154 IPR000008 -
Lan17g0174 860 SUPERFAMILY Phospholipase D/nuclease 198 466 - -
Lan17g0174 860 Pfam PLD-like domain 564 742 IPR025202 -
Lan17g0174 860 PANTHER PHOSPHOLIPASE D DELTA 8 860 - -
Lan17g0174 860 MobiDBLite consensus disorder prediction 50 69 - -
Lan17g0174 860 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 705 732 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0174 Lan-Chr17 1094878 1102250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0174 1 696 Phospholipase D Gene Family (Wang group) AT4G35790 71.347 0.0 1050
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0174 K01115 - gmx:100814486 1480.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0174 17 1094878 1102250 Lan6g0223 6 1704693 1711692 LSH