Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0171 ATGGTGATGGAGCAAGACATTGAGAGTTGCGGGAGCAGAGCGTTGAAATCGTCGCAAAATGCTCATGCTCGTCATCACCGTCAGAAATTGGAGGTTTACAATGAGGTGCTTCGTCGAATTCAAGATTCCGATTGCGAGGAAGCTCGTGTTCCTGGCTTCGACGATCAGCTCTGGCTTCACTTCAATCGTCTTCCTGCTAGGTACGCATTGGATGTGAATGTGGAAAGGGCAGAAGATGTTCTTGCTCATAAGAGATTGCTCAAGTTGGCAGAGGAACCTAGCAACCAACCTGCATTTCAGGTTCGCTTAGTACAGGTATATCCTTCTGGCAGTGCAACTGATTCTGTGCATTTAGATCCTTCTGAGAAAGAAGATGCACAAAGTTCTCTTAACTATTCTTTTAAGCAGGGAATTCATCCACCACCTACTTTTGGTTCATCCTCTAATCTTGAAACTCTTCCACTTCAAACAACTAAAAATAACATTGAAGATGGGGGCAGTGCTATGGGTGTGACACCATGTTTTCCGAGGCCCATGCACGAGATTACCTTTTCAACAATTGACAAGCCCAAACTCCTTAGTCAGGAAACTGAGGAGCTTAAAGGTGTGTTGGAAAAGGAAATTTTGAAGGTTAAGGAGCAATATCTGTCAAATCAGGGCATACTTCCTGCTACTAATGAACAATACCAGGGAAGGATGGAACTCTCCCCTCATTGCATACACATACCTTCTGATGGAGCTGATGTGTGGGAAATTGATACCAATCAGTTGATCTATGGAAACAGAGTTGGCTCTGGGTCATTCGGTGACTTGTACAGAGGTACATATTGCAGCCAAGATGTGGCTATCAAAGTTCTAAAGCCTGAGCGCATAAGTACAGATATGCTGAAAGAGTTTGCACAAGAAGTCTATATCATGAGGAAGATTCGACACAAGAATGTTGTTCAATTCATCGGTGCATGTACCCGACCACCAAATCTTTGTATTGTTACTGAGTTTATGTCTAGAGGGAGCTTATACGACTATCTGCACAAACAAAGGGGTGTATTTAAACTTCAATCTTTACTAAAAATAGCGATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAATTGGTCAAGGTGGCTGATTTTGGGGTTGCTAGAGTGCAAACTCAGTCTGGAGTGATGACAGCTGAAACTGGAACATACCGCTGGATGGCACCAGAGGTCATTGAACACAAACCATATGACCAGAAGGCAGATGTTTTCAGTTTTGGAATATCTCTTTGGGAGCTTTTAACTGGAGAACTGCCTTACTCTCACTTGACCCCATTACAAGCAGCTGTTGGCGTCGTGCAGAAGGGCTTACGGCCTACAATCCCCAAAAATACACATGCAAGACTTTCGGAATTGCTCCAGTGCTGCTGGAAACAAGATCCAATGGAGAGACCGAATTTTGCCGAAATAATAGAAATTCTTCGGCAGATAACAAACGAGGTCAATGATGGAAAAACAGATGGACAAAAAGATAAGGCATCTCATTCCTTTCTCTCATCATTTAAACGCTCTCATCACTGA 1617 0.4292 MVMEQDIESCGSRALKSSQNAHARHHRQKLEVYNEVLRRIQDSDCEEARVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEEPSNQPAFQVRLVQVYPSGSATDSVHLDPSEKEDAQSSLNYSFKQGIHPPPTFGSSSNLETLPLQTTKNNIEDGGSAMGVTPCFPRPMHEITFSTIDKPKLLSQETEELKGVLEKEILKVKEQYLSNQGILPATNEQYQGRMELSPHCIHIPSDGADVWEIDTNQLIYGNRVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDYLHKQRGVFKLQSLLKIAIDVSKGMNYLHQNNIIHRDLKTANLLMDENELVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGISLWELLTGELPYSHLTPLQAAVGVVQKGLRPTIPKNTHARLSELLQCCWKQDPMERPNFAEIIEILRQITNEVNDGKTDGQKDKASHSFLSSFKRSHH* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0171 538 ProSiteProfiles Protein kinase domain profile. 257 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0171 538 SMART serkin_6 257 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0171 538 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 195 523 - -
Lan17g0171 538 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 16 197 - -
Lan17g0171 538 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 195 523 - -
Lan17g0171 538 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 197 - -
Lan17g0171 538 Pfam Protein tyrosine and serine/threonine kinase 259 506 IPR001245 GO:0004672|GO:0006468
Lan17g0171 538 ProSitePatterns Protein kinases ATP-binding region signature. 263 284 IPR017441 GO:0005524
Lan17g0171 538 SUPERFAMILY Protein kinase-like (PK-like) 238 506 IPR011009 -
Lan17g0171 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Lan17g0171 538 MobiDBLite consensus disorder prediction 516 530 - -
Lan17g0171 538 Gene3D Transferase(Phosphotransferase) domain 1 336 536 - -
Lan17g0171 538 MobiDBLite consensus disorder prediction 514 538 - -
Lan17g0171 538 CDD STKc_MAP3K-like 263 506 - -
Lan17g0171 538 PRINTS Tyrosine kinase catalytic domain signature 331 344 IPR001245 GO:0004672|GO:0006468
Lan17g0171 538 PRINTS Tyrosine kinase catalytic domain signature 368 386 IPR001245 GO:0004672|GO:0006468
Lan17g0171 538 PRINTS Tyrosine kinase catalytic domain signature 414 424 IPR001245 GO:0004672|GO:0006468
Lan17g0171 538 PRINTS Tyrosine kinase catalytic domain signature 433 455 IPR001245 GO:0004672|GO:0006468
Lan17g0171 538 PRINTS Tyrosine kinase catalytic domain signature 477 499 IPR001245 GO:0004672|GO:0006468
Lan17g0171 538 Gene3D Phosphorylase Kinase; domain 1 247 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0171 Lan-Chr17 1073787 1082920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0171 2 537 MAP Kinase Kinase Kinase AT4G35780 62.326 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan17g0171 PK_Tyr_Ser-Thr 9.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0171 - - gmx:100816767 929.087