Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0157 ATGGTTATTTCTAATGACAACATTTCTAACTCAATCAACTCCACAACCTTACAAGATCAAATGGGCACCAGAAAGTTTGAGCAGAATAACAGAAGAGCCTTAGCTATCATTAATCAGAATATGGCAGTTAACAAAAGGGCTTTCTCAGAAAAACATGGTGTTTGTGAGAAGAAGCAAGCAGATCCAGTTCATAGACCAATCACCAGGAGTTTGGCTGCACAAATTGCCAGCACAAAGCAAACTCGTGCCGAGGGAAACAAGAAGTCAAACTTCGGAATTTCGAATCCGAATGACTTTGGACAGTGCATTTGTATTGATGATGAACCATCAAAGTCAATGGAAGACCAGCAAGTGCCGATGTCTTTAGAGCAAACAGAAGCAATGCTAAGTGAACCAGATCATATGGAGGAAATTGAGATGGAGGATATAGATGAGGAGCCTCTTTTGGATATTGATAACAGTGATGCAAATAACCCTCTTGCAGTTGTGGACTATATTGAAGATCTTTATGCACACTACAGAAAAATTGAGAGAGCTAGCTGTGTCTCACCGAATTATATGGCAGAACAATTCGACATAAACGAAAGGATGAGAGCTGTACTGATTGACTGGCTTATTGAGGTTCACGACAAATTCGAACTCCTGCATGAGACATTGTTTCTCACGGTTAATCTCATAGATAGATTTTTAGAAAAGCAGACAGTGGCAAGAAAGAAGCTTCAGTTGGTTGGCTTGGTTGCCATGTTGTTGGCATGCAAGTATGAAGAAGTTTCGGTTCCTGTGGTTGAAGATCTTATCCTTATATCAGACAAAGCATACTCAAGGAAGGAAGTTCTGGAAATGGAGAAGTTGATGGTCAACACATTACAGTTTAACATGTCTGTGCCAACATCATATGTTTTTATAAAAAGGTTCCTAAAGGCAGCTCAAGCAGACAAAAAACTTGAGCTACTAGCTTTCTTCTTGGTAGAACTATCTCTAGTGGAGTATCAGATGTTGAAGTTCCCACCATCTATGCTAGCTGCAGCCGGAGTCTATACAGCTCAATGCACTATCTACGGTTTCGAACAGTGGAGTAAGACATGTGAATGGCATGCCAACTATTCAGAAGATCAACTATTAGAGTGCTCTAGTTTAATGGTTGATTTTCACAAGAATGCTGAGACAGGGAAACTTACAGGGGTATATAGGAAATATTGCTCATCTAAGTTTAGCTACACTGCAAAATATGAACCAGCAAGTTTTCTTTTTGAGAACAACCCATTGTAG 1269 0.398 MVISNDNISNSINSTTLQDQMGTRKFEQNNRRALAIINQNMAVNKRAFSEKHGVCEKKQADPVHRPITRSLAAQIASTKQTRAEGNKKSNFGISNPNDFGQCICIDDEPSKSMEDQQVPMSLEQTEAMLSEPDHMEEIEMEDIDEEPLLDIDNSDANNPLAVVDYIEDLYAHYRKIERASCVSPNYMAEQFDINERMRAVLIDWLIEVHDKFELLHETLFLTVNLIDRFLEKQTVARKKLQLVGLVAMLLACKYEEVSVPVVEDLILISDKAYSRKEVLEMEKLMVNTLQFNMSVPTSYVFIKRFLKAAQADKKLELLAFFLVELSLVEYQMLKFPPSMLAAAGVYTAQCTIYGFEQWSKTCEWHANYSEDQLLECSSLMVDFHKNAETGKLTGVYRKYCSSKFSYTAKYEPASFLFENNPL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0157 422 Gene3D - 168 408 - -
Lan17g0157 422 SMART cyclin_7 203 287 IPR013763 -
Lan17g0157 422 SMART cyclin_7 300 382 IPR013763 -
Lan17g0157 422 Gene3D - 182 294 - -
Lan17g0157 422 ProSitePatterns Cyclins signature. 198 229 IPR006671 -
Lan17g0157 422 SMART Cyclin_C_2 296 413 IPR004367 -
Lan17g0157 422 SUPERFAMILY Cyclin-like 295 413 IPR036915 -
Lan17g0157 422 CDD CYCLIN 197 286 IPR013763 -
Lan17g0157 422 PANTHER CYCLIN-B2-1 21 416 - -
Lan17g0157 422 PIRSF Cyclin_A_B_D_E 3 421 IPR039361 -
Lan17g0157 422 SUPERFAMILY Cyclin-like 157 293 IPR036915 -
Lan17g0157 422 CDD CYCLIN 294 381 IPR013763 -
Lan17g0157 422 Pfam Cyclin, N-terminal domain 168 294 IPR006671 -
Lan17g0157 422 PANTHER CYCLINS 21 416 IPR039361 -
Lan17g0157 422 Pfam Cyclin, C-terminal domain 296 409 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0157 Lan-Chr17 985111 988108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0157 1 417 Core Cell Cycle Gene Families AT1G20610 58.161 1.16e-171 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0157 K21777 - gmx:100798068 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0157 17 985111 988108 Lan6g0244 6 1825121 1828188 LSH