Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0151 ATGGATTCTTCGCCGACCACTTTACTCACCAATCTCCTTGTTTTCAACAATACCATTCAACAAGAGTTGATGAGGAGCGTGCATGTGTATGAGGGAGGAAGGAAAGTAGAAAGAGAGTTTGTGTTTTCAGAGAATGGCTCCTCCTATGTGGAAATGAAGAAAGCTACCCCAATTCTTATTTTACTCAATAATTTTTGTGTTTCTCAGGTTTCTGAAGAGTATCAGAATGGAGTGTGGCATTGTATCTTTGCCTTTCACTCTAATCACATGCCTCAATTTTCAAACATTCCACCCTTGTTATTGGTCACAAGAAATCCAAAGCTTCAGACAATTCCAAACTTGCATAATGATCTCCATATGATATACAATTTGGGCTGGAAGGCAAAAGAAAAGGATATACCACAAGGATCTTCAAGGGATGAATCGGAAGGAAATAGTAACGACCTCCAACCATCGCAAAGTGTCTTGCCCGTGCTTTACCAGGATCTCAATTGTCTTCCTTATGAAGAAGACGTGTCTGACTCTGAGTTTCAGGACAATGAGATGAATGATGAAAGCTTACCAGGTTTCACAGAGAAGAAAAAGAGGACACCTAGTGACCACATAGCAAAAATTGCTTTATCAGATTTGATCAAGTACTTCGATATGCCAATTGTAGAAGCATCGAGACATCTAAATGTCGGGCTTACTGTTCTAAAGAGAAAGTGCAGAGAATTTGGTATTCACCGCTGGCCTCATAGGAAAATTAAATCACTTGATAATCTCATTCATGATCTTCAGGAAGAGGCAAAACAGCAAGAATCAAAGGACAAGGCTGCAGCCATGGCTGTAACAGAAAGGAAAAGGATGCTGGAGAGTGAAAAAGAGAACATAGAGAAGAAACCCTTCATGGACATACAAACTGAGACCAAGAGATTCAGGCAGGATGTTTTCAAGAGAAGGCACAGAGCTAGAGCTAGTGAAAAGCGGAGTTCTACACCGGCCGCCGCCACTTAG 996 0.4116 MDSSPTTLLTNLLVFNNTIQQELMRSVHVYEGGRKVEREFVFSENGSSYVEMKKATPILILLNNFCVSQVSEEYQNGVWHCIFAFHSNHMPQFSNIPPLLLVTRNPKLQTIPNLHNDLHMIYNLGWKAKEKDIPQGSSRDESEGNSNDLQPSQSVLPVLYQDLNCLPYEEDVSDSEFQDNEMNDESLPGFTEKKKRTPSDHIAKIALSDLIKYFDMPIVEASRHLNVGLTVLKRKCREFGIHRWPHRKIKSLDNLIHDLQEEAKQQESKDKAAAMAVTERKRMLESEKENIEKKPFMDIQTETKRFRQDVFKRRHRARASEKRSSTPAAAT* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0151 331 Pfam RWP-RK domain 205 252 IPR003035 -
Lan17g0151 331 Coils Coil 274 294 - -
Lan17g0151 331 MobiDBLite consensus disorder prediction 174 195 - -
Lan17g0151 331 Coils Coil 249 269 - -
Lan17g0151 331 ProSiteProfiles RWP-RK domain profile. 187 272 IPR003035 -
Lan17g0151 331 MobiDBLite consensus disorder prediction 132 151 - -
Lan17g0151 331 MobiDBLite consensus disorder prediction 311 331 - -
Lan17g0151 331 PANTHER PROTEIN RKD5 13 323 - -
Lan17g0151 331 PANTHER PROTEIN RKD4 13 323 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0151 Lan-Chr17 934763 939475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0151 19 322 AtRKD Transcription Factor Family AT4G35590 51.104 6.71e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lan17g0151 RWP-RK 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0151 - - gmx:100306328 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0151 17 934763 939475 Lan18g0083 18 610357 614631 LSH