Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0145 ATGGGAAATGCATCAAAATGGTTTTGTGGACTTGTATGTCTCACAAAACATGATGCTTCTGATTCACACAATTCTTCTTTTCCAATCAAATCACCCAACCAAAAATGGCGTTGGAGTTTCCTCAAGTCTTATGAAGATAACCCACAACAATGGGCAGCCATTAAGATTCAAGCCGCGTTTCGAGCCTGTTTGGCAAGGAGGGCACTGAGAGCTCTAAAAGGATTGGTGATGTTGCAAGCATTAGTGAGAGCTGAAATTGATAGGAAACGCACAGCAGAGTTCCTTCAAAGAATGCATCCATTTTCAGGAGCACAGGCCCGAGCCCGCGCCGCCCGAGCCTGCGCCGCCCAGGCCCAATTTTCACAGGCTTCTTGGACTGCAAAGCCCTCATCCACTAGCCACATCCATGGACCAGCAACACCAGACAAATTTGAAAGCCCAATCAGATTTGTGAGCATGAAATTTGATCACCCATCATTAGTACTCAAGGTATTTTCTTTCATCCCTTTTCTATCAAAGGGATAG 525 0.4571 MGNASKWFCGLVCLTKHDASDSHNSSFPIKSPNQKWRWSFLKSYEDNPQQWAAIKIQAAFRACLARRALRALKGLVMLQALVRAEIDRKRTAEFLQRMHPFSGAQARARAARACAAQAQFSQASWTAKPSSTSHIHGPATPDKFESPIRFVSMKFDHPSLVLKVFSFIPFLSKG* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0145 174 Gene3D - 47 100 - -
Lan17g0145 174 ProSiteProfiles IQ motif profile. 49 77 IPR000048 GO:0005515
Lan17g0145 174 PANTHER CALMODULIN BINDING PROTEIN IQD22 46 128 - -
Lan17g0145 174 Pfam IQ calmodulin-binding motif 51 70 IPR000048 GO:0005515
Lan17g0145 174 PANTHER IQ-DOMAIN 5-RELATED 46 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0145 Lan-Chr17 885267 888371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0145 50 160 IQD Protein Family AT4G23060 48.673 4.35e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0145 - - lang:109330779 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1108 17 18115791 18123841 Lan17g0145 17 885267 888371 PCT