Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0138 ATGAAGTTATGTAGTAGTTGGTTGTTGATTTCCATGTTCACACTCTCTCTTCTTGCTTCTGCTACTGTGCCCCCAAATGAAGTTTGGGGGCTTACAAGTTTTAGAGAAGCTATATATGAAGACCCATACCTAGTTTTATCAAATTGGAACACTTTGGATTCAGATCCTTGTGATTGGTTTGGTGTCTCATGCACTATGGCTGGTGATCATGTCCTCAAGCTAAACATCTCAGGATCATCATTAAGAGGCTTTATTGCACAAGAATTGGGGCATATCACTTACTTGCAAGAATTAATTTTACATGGCAACAATCTCATTGGCACAATACCTAAAGAGTTGGGCATGTTGAAATCTCTCAAGGTGTTGGATTTAGGAAAGAATCAGTTATCAGGACCAATTCCTCCAGAGATTGGAAATTTAACTCTAGTTGTGAACATAAACCTACAGTCCAATGGGTTGACTGGCAAGCTACCTGCAGAGCTTGGAAATTTGAGATACCTTCAAGAACTTCGGCTAGATAGGAATAGACTTCAAGGATCTGTCCCTGCTAGTAGCAGTTCAAATTTTGATTCAAATATGCATGAGATGTATGCCTCAAAAGCGAATTTGACTGGCTTCTGTCGTTCATCTCAGTTAAAAGTTGCAGACTTTTCATATAACTTTTTAGTTGGTAACATACCCAAATGCTTGAAGTATCTTACAAGGTCAAGCTTTCAAGGGAACTGCCTCCAGAGCAAAGACTTGGAGCAGCGCCCTTCTTTACAATGTGCTGGTGCTTCACCTGCCAAGAGCCAGCCTGTGGCGAATCCAAACCACCAGCGAGCCGAATATGAGTTGAAGCATCACGGAACATCAAAACCAGTATGGCTTTTGATTCTAGAAATAGTATCAGGAGCCATTGTTTGTTCTCTCTTTCTGGTTGCAGTTCTCACTGCTTGTCTGAAGTGTAACAAAAAAGCATCAATTATTATTCCTTGGAAAAAGTCTTCAAGCCAGAAAGAGCATACATCAGTATATATAGACCCCGAGATGTTGAAGGATGTGAGGAGTTATAGCAGACAAGAGCTTGAAGTGGCATGTGAAGACTTCAGCAACATAATTGGGTCCTCAGCAGACAGTGTGGTCTATAAGGGAAACATGAAAGGTGGGCCTGAGGTTGCTGTGATTTCTGTCAGCATCAAGGAGGAGCATTGGACAGGATATCTTGAACTCTATTTTCAGAGAGAGGTAGCAGACTTGGCAAGGCTAAATCATGAGAATACAGGAAAACTGTTGGGCTATTGTAGAGAAAGCACTCCATTCACAAGGATGTTGGTGTTTGAGTATGCTTCAAATGGGACACTTTATGATCACCTACATTGTTATGAAGGGTGCCAGTTCTCTTGGACACGGCGTATGAAAATTGTGATAGGCATTGCACGCGGACTCAGGTATTTGCACACAGAAGCTGAGCCTCCATTCACTATTTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCACCCAAGTTGGTTGATTTTGAAAGTTGGAAGTCAATCCTTGAAAGATCAGAAAAGAATTCTGGTTCTATTGGCAGTCAAGGTGCTGTCTGCGTTCTTACAAATTCGCTCGAGGCACGACATCTTGATACCAAAGGAAACATATATGCTTTTGGGGTGCTTCTGCTGGAGATAATCAGTGGCAGACCACCATACTGTAATGAGAAAGGGTACTTGGTGGATTGGGCCAAGGGATATATTGAAATTCCAGAAGTAATGTCACATGTGGTGGATCCTGAATTGAAACATTTTCGACAGGAAGACCTCGAAGTAATATGTGAGGTAGTAAGTCTTTGTATCAACCCTGATACCACTGCATGTCCATCAACACGAGAACTATGCAGCATGCTGGAGAGCAGAATTGACACTTCAATAAGGGTGGAGCTCAAATCCTCATCTTTAGCATGGGCTGAACTTGCACTTTCATCATAA 1980 0.4177 MKLCSSWLLISMFTLSLLASATVPPNEVWGLTSFREAIYEDPYLVLSNWNTLDSDPCDWFGVSCTMAGDHVLKLNISGSSLRGFIAQELGHITYLQELILHGNNLIGTIPKELGMLKSLKVLDLGKNQLSGPIPPEIGNLTLVVNINLQSNGLTGKLPAELGNLRYLQELRLDRNRLQGSVPASSSSNFDSNMHEMYASKANLTGFCRSSQLKVADFSYNFLVGNIPKCLKYLTRSSFQGNCLQSKDLEQRPSLQCAGASPAKSQPVANPNHQRAEYELKHHGTSKPVWLLILEIVSGAIVCSLFLVAVLTACLKCNKKASIIIPWKKSSSQKEHTSVYIDPEMLKDVRSYSRQELEVACEDFSNIIGSSADSVVYKGNMKGGPEVAVISVSIKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRESTPFTRMLVFEYASNGTLYDHLHCYEGCQFSWTRRMKIVIGIARGLRYLHTEAEPPFTISELNSSAVYLTEEFSPKLVDFESWKSILERSEKNSGSIGSQGAVCVLTNSLEARHLDTKGNIYAFGVLLLEIISGRPPYCNEKGYLVDWAKGYIEIPEVMSHVVDPELKHFRQEDLEVICEVVSLCINPDTTACPSTRELCSMLESRIDTSIRVELKSSSLAWAELALSS* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0138 659 Pfam Leucine rich repeat N-terminal domain 30 64 IPR013210 -
Lan17g0138 659 Gene3D Ribonuclease Inhibitor 142 265 IPR032675 -
Lan17g0138 659 Gene3D Ribonuclease Inhibitor 30 141 IPR032675 -
Lan17g0138 659 SUPERFAMILY Protein kinase-like (PK-like) 337 634 IPR011009 -
Lan17g0138 659 Pfam Protein tyrosine and serine/threonine kinase 364 571 IPR001245 GO:0004672|GO:0006468
Lan17g0138 659 Gene3D Transferase(Phosphotransferase) domain 1 443 649 - -
Lan17g0138 659 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 659 - -
Lan17g0138 659 SUPERFAMILY L domain-like 25 234 - -
Lan17g0138 659 ProSiteProfiles Protein kinase domain profile. 361 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0138 659 Gene3D Phosphorylase Kinase; domain 1 333 442 - -
Lan17g0138 659 PANTHER PROTEIN MALE DISCOVERER 2 9 659 - -
Lan17g0138 659 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0138 Lan-Chr17 835391 839916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0138 1 639 Receptor kinase-like Gene Family AT2G35620 27.854 6.76e-53 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lan17g0138 PK_Tyr_Ser-Thr 2.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0138 - - gmx:100794714 1074.69