Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0136 ATGTTAGGAGCGTTATCTTTGTTCCGAAGCAGCAACGAAGAATGGACTCCTCTTTCTCCACGTTCTCATTACCCTTCCATGCCATCATATCCCAACACCACCGATCACGTTCTTTCATACACCACCGCCGTTTTCTCCGTCGTCGGAATGAGTTGCGCCGCCTGCGCTGGATCTGTTGAGAAATCCATTAAGCGACTTCCTGGTATTCGTGAAGCTGCTGTTGATCTCATCAATAACCGCTCTCTAGTCATCTTTTCCCCCTCCTTCCTCAACGAGGAGACGATTCGGGAGGCAATTGAAGATGCTGGATTTGAAGCTACGTTGCTGACAGTAACAGATGAGTTGAATGATAAATCGGTTCAAGTATGCCGAATTCAAATTAAAGGAATGACTTGTACTTCATGTTCATCAACTATTGAATCTGCTCTCCAAGCTATACAAGGTGTGATCGAAGCTCGAGTTGCATTGGCAACTGAAGAAGCTCAAGTACACTATAATGCTAATGTTGTTAACTACAATCAAATTTTGGAAGCTGTACAAGACACTGGATTTGAAGCTTCACTTATCAGTTCCGGTGAAGACATGTTCAAGATAGACCTATTGGTTCAAGGTGCACTCGATGAGCATTCGATGAAACTGATCAAAGAATCTCTTGAGGTACGCCCTGGGGTTCTAGGTGTTGAGATACATCAGGAGTTCAACAAGATATCAATTTCTTATAAACCAGACATGACAGGACCAAGGGATTTCATTAAGGTTATTGAGGAAACCGAGCCGGGGAATTTCAAAGCAAATATATTTCCCCCTGAAGGAGGACAAAGGGATGCTCATAGGAACGAGGAAATAAGACAGTATTATAGATCTTTCTTATGGAGTTTGATGTTTACTATTCCTGTGTTTCTAACCTCTATGGTGCTTATGTATATCCCTGGAATTAAGCATGTGCTGGATACCAAAGTTGTCAATATGCTAACATTAGGAGAGGTTGTAAGATGGGTGCTTGTCACACCAGTACAGTTCATTATAGGCCGGCGATTTTACTCTGGGTCCTACAAATCATTACGCCGTGGCTCTGCGAATATGGATGTTTTGATTGCTTTGGGAACAAATGCAGCTTACTTCTATTCAGTCTACTCTGTCCTGAGAGCTGCTACCTCAAAGACTTTCATGGGTACTGATTTCTTCGAGACTAGTGCAATGCTTATTTCATTCATTCTTCTTGGAAAGTATCTTGAAATTGTAGCCAAGGGGAAGACATCCAATGCAATCGCCAAGCTCATGAACTTGACACCGGACACAGCTATATTGTTAACCCTGGACAATGAAGGAAATGTTACTGGTGAAGAAGAAATTGACAGCCGATTGGTTCAAAAGAATGATGTGATTAAAATTATTCCTGGTGCAAAAGTTGCTTCTGATGGATTTGTTATATGGGGCCAGAGTCATGTGAACGAGAGCATGATAACGGGCGAGGCACGCCCTGTGGCGAAGAGGAAAGGTGACCCTGTTATTGGAGGAACTGTGAATGAGAAGGGAGTGTTGCGTATTAAGGCAACACGAGTCGGATCAGAAAGTGCTCTTTCCCAGATTGTTCGGCTTGTTGAGTCAGCACAAATGGCCAAGGCACCTGTGCAGAAGTTTGCTGACCGCATTTCAAAATACTTTGTGCCTCTGGTAATCTTGACATCAATTGCAACTTGGCTTGCCTGGTTTTTAGCTGGAAAATTTCATGCTTACCCCAAGTCTTGGATACCATCTTCCATGGACAGCTTTGAGCTTGCTTTGCAGTTTGGAATCTCTGTCATGGTCATAGCCTGCCCTTGTGCTTTGGGTTTAGCAACACCAACTGCTGTTATGGTTGGCACTGGAGTTGGTGCAACTCAAGGTGTGCTGATCAAAGGAGGGCAAGCATTAGAGAGTGCACATAAGGTGAACTGCATTGTCTTTGACAAGACAGGTACACTCACTATTGGGAAACCTGTGGTAGTAAGTACAAAACTTTTGACAAATATGGTACAGCGGGAATTCTATGAACTTGTGGCTGCAGCTGAGGTGAATAGTGAGCATCCACTAGCTAAGGCCATTGTTGAGTATGCCAAAAAGTTTAGAGATGAAGAAAACCCTGCTTGGCCTGAAGCACGGGATTTTGAATCCATTACTGGACATGGAGTAAAGGCCATTGTTCGGAGCAAGGAAATAATTATAGGCAACAAGAGCTTGTTTGTTGACCAAAATGTTGCAATTCCCATTGAGGCCGAAGATATACTTGCTGAAGCCGAAGGGATGGCTCAAACCGGAATTCTGGTATCTATAAATGGGAAAGTGGCTGGGGTTTTAGCAGTATCTGATCCATTGAAACCAGGTGCTCCAGAAATCATTTCCATTCTCAAGTCTATGAAAATTAGGAGCATCATGGTGACTGGGGACAACTTGGGAACTGCTAACTCTATTGCAAAGGAAGTTGGGATTGAATCTGTTATTGCTGAGGCCAAACCAGAGCAGAAAGCAAAGCATGTGAAAGACTTGCAGAAGGAGAGAATATGTGAGGCCATTGAAGATGCTGGATTTCAAGCCAAGTCCATTGATGAAGAATCCAATGACACCTCTTCCCAAATATGTAGAATACACATTAAGGGCATGACATGTACTTCTTGCTCCTCCACTATTGAATCAGCTCTGAAAACCATTCATGGGGTGCAGAAAGCAAGAGTGGCCTTAGCAACTGAAGAAGCAGAAATATGTTATGACCCTAACATTGTGAGCCACAACCAGCTAATGGAAACTATAGAAGATGCTGGGTTTGAAGCCATATTAATAAGCACAGGGGAACACATAAGCAAGATAGAGTTTAAAGTTCATGGCATTCTAAATGATGAATCTATCAGTGCTATTGAACATTCTCTTAAGGCACTACCAGGTGTTGAAACTATAGACATATATCCACACATTAATAAAATTACCATAACTTATAAACCATATATGACAGGACCTAGAACTTTTATACAAGTTATAGAATCTACTGGATCAGGTTGTTTTAGAGCAGTGATATTTCCAAATGAAGGAGGAAGAGAAACACATAGACAAGAGGAAATTAAAAGATACTTCAAATTCTTCATATGGAGTTTGGCTTTAACAATTCCTGTTTTTTTAACATCCATGGTACTTATGTATATACCTGGAGTTAAACATGTTCTAGACATGAAAGTTGTTAATATGCTGAACATTGGATTGCTCTTGAGGTGGGAGTTTTCTACTCCAGTGCAGTTTATAATAGGCATGAGATTCTACATTGGTTCATATAAAGCATTGAGAAAAGGTTCTGCTAACATGGATGTGTTGATTGCCTTAGGAACCAATGCAGCATATTTCTATTCTGTCTATGTTGTAGCAAGAGCAGCTTTCTCTAAAGACTTTGAAGGCAGTGATTTTTTTGAGACTAGTGCTATGCTTATTTCATTTATTCTACTTGGCAAGTATTTGGAAGTGTTGGCAAAAGGGAAAACTTCTCAAGCAATTGCAAAGCTTATGGACTTGACACCTGACACTGCAACCCTTTTAACTCAAGATGATGAAGGAAATGTGATTAGTGAACAACAAATTGATAGCAGGTTGATACAAAAGAATGATGTGATCAAAATTGTGCCTGGTGCAAAAGTAGCATCAGATGGTCTTGTCATGTGGGGAAAAAGCCATATAAATGAGAGCATGATAACTGGAGAGGCTAGGCCTGTGGCTAAGAGGAAGGGTGATATGGTGATTGGAGGCACAGTGAATGAGAATGGGGTTTTGCATGTCAAGGTAACAAGAGTTGGATCAGAGAGTGCACTCTCCCAAATTGTTAGGCTTGTTGAGTCTGCCCAGATGGCTAAGGCACCAGTGCAGAAACTTGCAGACCACATTTCTAAATATTTTGTCCCTTTGGTCATTTTGCTTTCTCTTTCAACTTGGCTTTCATGGTTTTTAGCAGGACAATTACATGCATATCCAAAATCTTGGATACCATCCTCTATGAACAGCTTTGAGCTTGCACTTCAGTTTGGGATATCAGTTATGGTCATAGCTTGCCCTTGTGCTCTAGGCCTAGCCACTCCTACAGCTGTCATGGTTGGTACTGGAGTTGGTGCAACTCAAGGTGTGTTGATCAAAGGAGGGAAAGCCTTAGAAAGTGCACATAAGGTGAATTGCATTGTATTTGATAAGACAGGTACTCTGACAGTTGGGAAGCCAGTGGTTGTTACTACAAAACTCTTCAAAAATATGTCACTTCAAGATTTCTACGAATTTGTTGCTGCAGCAGAGGTGAACAGTGAGCATCCAATAGGCAAGGCAATTGTTGAGCATGCCAAGAAGACAACAGAATATCATGAACAAAATCATCCCTTGCCAGAAGCAAGTCACTTTGTTTCTGTTTCAGGTCATGGAGTGAAGGCAATTGTGAAAAACAAGGAAATAATGGTTGGTAACAAGAAACTGATGTTGGATCATAACATAAGCATTTCAGTAGATGCTGTAGAAATGCTAGCAGAAGCTGAAAAACTGGCTCAGACTGGGATTCTGGTATCACTGGATGGAGAAATAGCTGGAGTTTTGGCAGTATCTGACCCATTGAAACCTGATGCCAAACAAATTATTTCAATTCTGAACTCAATGAAGATCAGGAGCATCATGGTGACAGGTGATAATTGGGGAACTGCCAATTCCATAGCTAGACAAGCTGGTATTGAAACTGTCATTGCAGAGGCTCAACCTGAGGCCAAAGCTATTAAAGTAAAAGATTTGCAGAGTTCAGGGTACACTGTGGCAATGGTTGGAGATGGAATAAATGACTCACCAGCACTAGTGGCAGCTGATGTAGGAATGGCAATAGGTGCTGGCACTGACATAGCTATTGAAGCTGCTGACATAGTTCTAATGAAGAGCAACTTAGAGGATATCATCATTGCCATTGACCTTGCTAAGAAAACTTTCTCACGTATTGGCCTGAACTACATTTGGGCTCTTGGTTATAATCTACTAGCTATACCAATTGCAGCAGGGGTCCTTTACCCATTCACTAGGTTCAGGTTACCACCATGGATTGCCGGAGCCGCTATGGCTGCTTCTTCTGTTACTGTTGTTTGTTCCTCACTCTTGTTAAAGAATTACAAGAGACCAAAGATGCTAGAAAACTTAGACATAAATGGTATTAAGATTGGATAG 5199 0.4162 MLGALSLFRSSNEEWTPLSPRSHYPSMPSYPNTTDHVLSYTTAVFSVVGMSCAACAGSVEKSIKRLPGIREAAVDLINNRSLVIFSPSFLNEETIREAIEDAGFEATLLTVTDELNDKSVQVCRIQIKGMTCTSCSSTIESALQAIQGVIEARVALATEEAQVHYNANVVNYNQILEAVQDTGFEASLISSGEDMFKIDLLVQGALDEHSMKLIKESLEVRPGVLGVEIHQEFNKISISYKPDMTGPRDFIKVIEETEPGNFKANIFPPEGGQRDAHRNEEIRQYYRSFLWSLMFTIPVFLTSMVLMYIPGIKHVLDTKVVNMLTLGEVVRWVLVTPVQFIIGRRFYSGSYKSLRRGSANMDVLIALGTNAAYFYSVYSVLRAATSKTFMGTDFFETSAMLISFILLGKYLEIVAKGKTSNAIAKLMNLTPDTAILLTLDNEGNVTGEEEIDSRLVQKNDVIKIIPGAKVASDGFVIWGQSHVNESMITGEARPVAKRKGDPVIGGTVNEKGVLRIKATRVGSESALSQIVRLVESAQMAKAPVQKFADRISKYFVPLVILTSIATWLAWFLAGKFHAYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVVVSTKLLTNMVQREFYELVAAAEVNSEHPLAKAIVEYAKKFRDEENPAWPEARDFESITGHGVKAIVRSKEIIIGNKSLFVDQNVAIPIEAEDILAEAEGMAQTGILVSINGKVAGVLAVSDPLKPGAPEIISILKSMKIRSIMVTGDNLGTANSIAKEVGIESVIAEAKPEQKAKHVKDLQKERICEAIEDAGFQAKSIDEESNDTSSQICRIHIKGMTCTSCSSTIESALKTIHGVQKARVALATEEAEICYDPNIVSHNQLMETIEDAGFEAILISTGEHISKIEFKVHGILNDESISAIEHSLKALPGVETIDIYPHINKITITYKPYMTGPRTFIQVIESTGSGCFRAVIFPNEGGRETHRQEEIKRYFKFFIWSLALTIPVFLTSMVLMYIPGVKHVLDMKVVNMLNIGLLLRWEFSTPVQFIIGMRFYIGSYKALRKGSANMDVLIALGTNAAYFYSVYVVARAAFSKDFEGSDFFETSAMLISFILLGKYLEVLAKGKTSQAIAKLMDLTPDTATLLTQDDEGNVISEQQIDSRLIQKNDVIKIVPGAKVASDGLVMWGKSHINESMITGEARPVAKRKGDMVIGGTVNENGVLHVKVTRVGSESALSQIVRLVESAQMAKAPVQKLADHISKYFVPLVILLSLSTWLSWFLAGQLHAYPKSWIPSSMNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGKALESAHKVNCIVFDKTGTLTVGKPVVVTTKLFKNMSLQDFYEFVAAAEVNSEHPIGKAIVEHAKKTTEYHEQNHPLPEASHFVSVSGHGVKAIVKNKEIMVGNKKLMLDHNISISVDAVEMLAEAEKLAQTGILVSLDGEIAGVLAVSDPLKPDAKQIISILNSMKIRSIMVTGDNWGTANSIARQAGIETVIAEAQPEAKAIKVKDLQSSGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDIIIAIDLAKKTFSRIGLNYIWALGYNLLAIPIAAGVLYPFTRFRLPPWIAGAAMAASSVTVVCSSLLLKNYKRPKMLENLDINGIKIG* 1733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0136 1732 ProSitePatterns E1-E2 ATPases phosphorylation site. 1399 1405 IPR018303 -
Lan17g0136 1732 Gene3D - 416 538 - -
Lan17g0136 1732 Gene3D - 1165 1287 - -
Lan17g0136 1732 SUPERFAMILY HAD-like 636 853 IPR036412 -
Lan17g0136 1732 PRINTS H+-transporting ATPase (proton pump) signature 1603 1619 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan17g0136 1732 PRINTS H+-transporting ATPase (proton pump) signature 1634 1659 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan17g0136 1732 SUPERFAMILY HMA, heavy metal-associated domain 119 192 IPR036163 GO:0046872
Lan17g0136 1732 ProSiteProfiles Heavy-metal-associated domain profile. 872 938 IPR006121 GO:0046872
Lan17g0136 1732 SUPERFAMILY Calcium ATPase, transmembrane domain M 394 1077 IPR023298 -
Lan17g0136 1732 SUPERFAMILY HMA, heavy metal-associated domain 40 110 IPR036163 GO:0046872
Lan17g0136 1732 SUPERFAMILY Calcium ATPase, transmembrane domain M 1145 1389 IPR023298 -
Lan17g0136 1732 SUPERFAMILY Calcium ATPase, transduction domain A 1197 1283 IPR008250 -
Lan17g0136 1732 Pfam Heavy-metal-associated domain 44 105 IPR006121 GO:0046872
Lan17g0136 1732 Pfam Heavy-metal-associated domain 875 935 IPR006121 GO:0046872
Lan17g0136 1732 Pfam Heavy-metal-associated domain 125 185 IPR006121 GO:0046872
Lan17g0136 1732 Gene3D - 655 731 IPR023299 GO:0000166
Lan17g0136 1732 Gene3D - 1404 1483 IPR023299 GO:0000166
Lan17g0136 1732 Gene3D - 732 783 IPR023299 GO:0000166
Lan17g0136 1732 Gene3D - 1484 1534 IPR023299 GO:0000166
Lan17g0136 1732 ProSitePatterns Heavy-metal-associated domain. 127 156 IPR017969 GO:0046872
Lan17g0136 1732 ProSiteProfiles Heavy-metal-associated domain profile. 42 108 IPR006121 GO:0046872
Lan17g0136 1732 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1150 1680 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan17g0136 1732 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 401 847 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan17g0136 1732 SFLD p-type atpase 1379 1654 IPR044492 -
Lan17g0136 1732 SFLD Haloacid Dehalogenase 1379 1654 - -
Lan17g0136 1732 ProSiteProfiles Heavy-metal-associated domain profile. 947 1008 IPR006121 GO:0046872
Lan17g0136 1732 ProSiteProfiles Heavy-metal-associated domain profile. 122 188 IPR006121 GO:0046872
Lan17g0136 1732 SUPERFAMILY HMA, heavy metal-associated domain 191 257 IPR036163 GO:0046872
Lan17g0136 1732 CDD HMA 125 187 IPR006121 GO:0046872
Lan17g0136 1732 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 844 1723 - -
Lan17g0136 1732 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 17 844 - -
Lan17g0136 1732 CDD P-type_ATPase_Cu-like 287 845 - -
Lan17g0136 1732 CDD HMA 949 1008 IPR006121 GO:0046872
Lan17g0136 1732 Pfam E1-E2 ATPase 447 626 - -
Lan17g0136 1732 Pfam E1-E2 ATPase 1178 1375 - -
Lan17g0136 1732 SUPERFAMILY Calcium ATPase, transduction domain A 448 534 IPR008250 -
Lan17g0136 1732 CDD P-type_ATPase_Cu-like 1038 1714 - -
Lan17g0136 1732 PRINTS P-type cation-transporting ATPase superfamily signature 1233 1247 - -
Lan17g0136 1732 PRINTS P-type cation-transporting ATPase superfamily signature 1397 1411 - -
Lan17g0136 1732 PRINTS P-type cation-transporting ATPase superfamily signature 1528 1539 - -
Lan17g0136 1732 PRINTS P-type cation-transporting ATPase superfamily signature 1550 1560 - -
Lan17g0136 1732 PRINTS P-type cation-transporting ATPase superfamily signature 1603 1622 - -
Lan17g0136 1732 PRINTS P-type cation-transporting ATPase superfamily signature 1626 1638 - -
Lan17g0136 1732 PANTHER ATP7, ISOFORM B 17 844 - -
Lan17g0136 1732 PANTHER ATP7, ISOFORM B 844 1723 - -
Lan17g0136 1732 SUPERFAMILY HAD-like 1396 1709 IPR036412 -
Lan17g0136 1732 CDD HMA 44 107 IPR006121 GO:0046872
Lan17g0136 1732 Gene3D - 1364 1659 IPR023214 -
Lan17g0136 1732 Gene3D - 615 858 IPR023214 -
Lan17g0136 1732 ProSitePatterns E1-E2 ATPases phosphorylation site. 650 656 IPR018303 -
Lan17g0136 1732 ProSitePatterns Heavy-metal-associated domain. 877 906 IPR017969 GO:0046872
Lan17g0136 1732 ProSitePatterns Heavy-metal-associated domain. 47 76 IPR017969 GO:0046872
Lan17g0136 1732 Gene3D - 35 109 - -
Lan17g0136 1732 Gene3D - 942 1016 - -
Lan17g0136 1732 CDD HMA 877 936 IPR006121 GO:0046872
Lan17g0136 1732 Pfam haloacid dehalogenase-like hydrolase 644 853 - -
Lan17g0136 1732 Pfam haloacid dehalogenase-like hydrolase 1393 1617 - -
Lan17g0136 1732 Gene3D - 121 193 - -
Lan17g0136 1732 Gene3D - 870 941 - -
Lan17g0136 1732 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 361 845 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lan17g0136 1732 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 1110 1712 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lan17g0136 1732 SUPERFAMILY HMA, heavy metal-associated domain 943 1011 IPR036163 GO:0046872
Lan17g0136 1732 SUPERFAMILY HMA, heavy metal-associated domain 870 943 IPR036163 GO:0046872
Lan17g0136 1732 TIGRFAM TIGR00003: copper ion binding protein 45 106 IPR006122 GO:0005507
Lan17g0136 1732 TIGRFAM TIGR00003: copper ion binding protein 875 936 IPR006122 GO:0005507
Lan17g0136 1732 TIGRFAM TIGR00003: copper ion binding protein 125 186 IPR006122 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0136 Lan-Chr17 818859 832081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0136 41 843 Primary Pumps ATPases AT1G63440 74.102 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0136 K17686 - gmx:100817431 1469.52