Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0133 ATGTACAAGTTTGATGAACTTTGGAAGGCTACCTCTGGTTTTGCAGAAGAAAAGATAGTTTCTGTGCATGGAGAAAAAGCTCCAAATGTAATCTATAAGGGGACACTTGCTAATGAAGTGGAAATTGCTGTCAAACGGTTCAATAAATCTGCATGGCCAGATTCCATGCAATTTTTTGAAGAAGCCAGGGTTGTTGGTCAGCTAAGGAACCAACGATTGGCGAACCTGCTCGGATGTTGTTGCGAAGCTGATAATAGGCTACTTGTTGCAGAATATATGCCCAATGATACTTTGGCAAACCACTTGTTCCATTGGGAATATCAGCCCATGAACTGGACAATGCGAATGAGAGTTGCGTTGCGCGTTGCCCAAGCTCTAGAATACTGTACCAGCAAAGGATGTGCAGTGTATCATGATCTAAATGCTTACAGAGTTCTTTTCGATAACGAAGCCAATCCTAGGCTCTCATGCTTTGGTCTGATGAAAAACAGTCAAGTTGGGAAAAGTTACAGCACAAACCTGGCATTTACTCCACCTGAGTATGTGAAGACAGGTAGAGTTTCTCCAGAATGTGTAACTTATAGCTTTGGGACGCTTTTGCTTGACCTTCTCAGTGGAAAACATATTCCTCCACGCTACGCACTTGACCAGTTTAGCGACAAGAATGGTCTGATTCTAACAGATTCTTGTTTAGAAGGCCAACTTTCAAATGACGAGCGAATCGACTTACTGTGTCTGGCTGCACATTGTTTACAATCTGAACCACAAGAGCGCCCTAATCCCAAGTCATTGGTCTCAGCTTTAATACCTCTACAGAAGGATTCCGAGGTTCCCTCTCATGTGCTAATGCCTATACCATTTGATGCTGATGCTTTACCCCTTTCTCCGCTCGGTGAAGCTTGTGTAAAAATGGATTTGACTGCTATACATGAAGTGATGATGAAGATTGGGTATAAAGATGATGAAGAGGGTACTGCAACTGAGCTAGGATTCCAAATATGGGTCGACCAATTGCAAAAGGCGTTGAACTCGAAGAAGAAGGGTGATGCTGCTTTTAGGCATAAGGACTTCAAGACAGCAATTAATAGCTACACAGAGTTCATTGAAATTGGATCTATGGTTTCTCCAACAGTTTATGCCCGCAGTAGTCTATGTTATCTCATGAACGATGTGCCGGAAGAAGCACTTAATGCTGCACTGCAGGCACAAGAAATATATCTTCACTGGTCACTTGCATCTTATTTACAAGCTGTGGCTCTTTTTGCACTGGGAAGGGAGGAGGAGGCCAAAGCAGCACTCAAAAAGGGTTCTACCTTGGAATGGAAGAAAAACAGAAAGTAG 1341 0.4295 MYKFDELWKATSGFAEEKIVSVHGEKAPNVIYKGTLANEVEIAVKRFNKSAWPDSMQFFEEARVVGQLRNQRLANLLGCCCEADNRLLVAEYMPNDTLANHLFHWEYQPMNWTMRMRVALRVAQALEYCTSKGCAVYHDLNAYRVLFDNEANPRLSCFGLMKNSQVGKSYSTNLAFTPPEYVKTGRVSPECVTYSFGTLLLDLLSGKHIPPRYALDQFSDKNGLILTDSCLEGQLSNDERIDLLCLAAHCLQSEPQERPNPKSLVSALIPLQKDSEVPSHVLMPIPFDADALPLSPLGEACVKMDLTAIHEVMMKIGYKDDEEGTATELGFQIWVDQLQKALNSKKKGDAAFRHKDFKTAINSYTEFIEIGSMVSPTVYARSSLCYLMNDVPEEALNAALQAQEIYLHWSLASYLQAVALFALGREEEAKAALKKGSTLEWKKNRK* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0133 446 Gene3D Transferase(Phosphotransferase) domain 1 94 285 - -
Lan17g0133 446 PANTHER TPR DOMAIN KINASE 2 444 - -
Lan17g0133 446 SUPERFAMILY Protein kinase-like (PK-like) 22 284 IPR011009 -
Lan17g0133 446 ProSiteProfiles Protein kinase domain profile. 17 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0133 446 SUPERFAMILY TPR-like 341 439 IPR011990 GO:0005515
Lan17g0133 446 Gene3D Tetratricopeptide repeat domain 335 446 IPR011990 GO:0005515
Lan17g0133 446 Pfam Protein tyrosine and serine/threonine kinase 31 268 IPR001245 GO:0004672|GO:0006468
Lan17g0133 446 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 2 444 IPR045845 GO:0004672|GO:0009742
Lan17g0133 446 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0133 Lan-Chr17 791406 796621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0133 1 279 Receptor kinase-like Gene Family AT3G58690 29.276 6.41e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lan17g0133 PK_Tyr_Ser-Thr 4.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0133 K14500 - gmx:100797107 667.151