Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0125 ATGCCATCTTGGTTGGGAAAGTTTACATCAAAAAAGGCTAAGAAGGAAAAGAAAGTCAAGATCTTTGACATGTTTCAACGTAAATTAAAATGCTCTTCCGAAGAGAAATTCAATGATAAATCAAGAGGGTCTAAGAGATATGATGCTGACACTATCTCAAAGAAGGAATATCAACCCCCCGTGCCTTCAAGATCACTATCACTATCACCCTCTAGACTTATTCTCTGCTGTAAACGTTTTTCAGAAAACCCTAATGCAACATCAGTAGTAGGAGGTGCTACAGGCTCAAAACCTCTTCATGTTTCAAATAGTGAAGAACCTACAAGTGGTGATGGAGATATAGGCAATGCATCTATTTCTAGTGATGGAAACTATAGTGATATAATTATTGAAGATCCACTTGCATTGATGGTTGATCCACTTAATCCCTTAGCACCTGATTTTGAAAATGGAAACAATGCCACCATGAACAGTTCTAGGGTACAGAGTGGTGAAAACACACCTCTTAATCCATTAGTAACCCTCAACAGTCTCCTATTTCCTTCAGCCAGTAGTTCTTCCGTGGAAACTTCTTCTCCTAGCAGTCCTGCTTCAGAAATTCTAATAGACCCTTTAAACTTTAAAAAAGGGAAGTTTCTTGGACGAGGATCATTTGGACAAGTGTTTCTTGGTTTTAACAGAGATAGTGGTATGATGTGTGCAATGAAGGAGGTAACCCTTTGTCCAGATGATGAGAAATCAATGGAAAGTGCAAAACAACTTCGCCAAGAAATAGCACTGCTTAGTCACTTGCGGCATCCACACATAATTCACTATTATGGATCTGAGACGGTAGATGACAAACTTTATATATTTTTGGAATATGCTGCTGGTGGGTCATTAAATAAGTTGCTTCGAGAATATGATCAACTTGGAGAAGATGCTATTCGTTTTTACACTGCACAAATTTTGTCAGGTCTTTCTTACTTGCATGGTAAAGGCATAGTCCATCGGGACATCAAAGGAGCAAACATATTAATGGACCCTAATGGAACACTGAAACTAGCAGATTTTGGAACTGCAAAATATATAAAGGGAGAGTCTTCTCCATTCTCTTTAAACGGAAGTCCTCATTGGATGGCACCTGAGGTCATTAAAAATCCAGGTGCTTGTGACCTTTCTGTTGATATATGGAGCCTTGGTTGTACCATTTTGGAAATGGCTACAACCAAACCACCCTGGAGTAAATTTGAAGGGGTTGCTGTTATGTACAAACTTGGGAACACTGATGAAGTGCCTAAAATCCCTAAGTACCTATCAAAACAAGGAAGGGACTTTCTTCGCCTTTGTCTACAAAGGGACCCGAAGGATCGTCCCTCAGCTGCTGAGCTTTTGCTGCATCCTTTTGTTAAAGATATTATAGTCGAAACAAATATTATGGTAAATATAATTGGAGTTTCTATCAAACTGTTAATCTTGTACTCTTTTATGCAGCAAAACCTTTCCCTTATACATATAGATTTGTTATTATTACATGCTGAAATTAGATAA 1530 0.383 MPSWLGKFTSKKAKKEKKVKIFDMFQRKLKCSSEEKFNDKSRGSKRYDADTISKKEYQPPVPSRSLSLSPSRLILCCKRFSENPNATSVVGGATGSKPLHVSNSEEPTSGDGDIGNASISSDGNYSDIIIEDPLALMVDPLNPLAPDFENGNNATMNSSRVQSGENTPLNPLVTLNSLLFPSASSSSVETSSPSSPASEILIDPLNFKKGKFLGRGSFGQVFLGFNRDSGMMCAMKEVTLCPDDEKSMESAKQLRQEIALLSHLRHPHIIHYYGSETVDDKLYIFLEYAAGGSLNKLLREYDQLGEDAIRFYTAQILSGLSYLHGKGIVHRDIKGANILMDPNGTLKLADFGTAKYIKGESSPFSLNGSPHWMAPEVIKNPGACDLSVDIWSLGCTILEMATTKPPWSKFEGVAVMYKLGNTDEVPKIPKYLSKQGRDFLRLCLQRDPKDRPSAAELLLHPFVKDIIVETNIMVNIIGVSIKLLILYSFMQQNLSLIHIDLLLLHAEIR* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0125 509 Gene3D Transferase(Phosphotransferase) domain 1 205 478 - -
Lan17g0125 509 MobiDBLite consensus disorder prediction 33 67 - -
Lan17g0125 509 Pfam Protein kinase domain 207 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0125 509 ProSitePatterns Protein kinases ATP-binding region signature. 213 236 IPR017441 GO:0005524
Lan17g0125 509 MobiDBLite consensus disorder prediction 87 119 - -
Lan17g0125 509 ProSiteProfiles Protein kinase domain profile. 207 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0125 509 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 166 473 - -
Lan17g0125 509 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 87 - -
Lan17g0125 509 MobiDBLite consensus disorder prediction 33 53 - -
Lan17g0125 509 SMART serkin_6 207 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0125 509 SUPERFAMILY Protein kinase-like (PK-like) 191 476 IPR011009 -
Lan17g0125 509 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 166 473 - -
Lan17g0125 509 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 87 - -
Lan17g0125 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 328 340 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0125 Lan-Chr17 741574 748987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0125 138 502 MAP Kinase Kinase Kinase AT1G63700 55.041 1.44e-134 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan17g0125 Pkinase 7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0125 K20717 - thj:104809383 404.445