Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0123 ATGGCTAAACAAGTGTGTGAAGAGACATCAAGGGACATGGTGTCATCATCTTCAGCTGGATTCTCATACAGTGATCATGTGCCACCAACCCATCATTTAGTGAACCAGATCCAAGGCTTTGTCTCTGACCCAGACATGTTCAACCTAACCTCAAACATGGAGATGATAGGGTTTCACAAGAATCAGCTTGATCATCATCAGCAACAAGAAGAGTGTGACCGCACCATGTGGAATAAAAGTAACAATTTCTTCTCAAAACCTGGACCATCTACTTCCAACAAGACCATGAATGAGTCGTGTACCAGTTTCTATGAATATAATAATAATAATAATAATCATAAACCAGATTTTACAACAGGGATTTCTGAAACAACAAGCAACGAGAATCTAATTATTGGAAGTACTACTCATGCAGATTCAGCTCCATGGCAAGAGAATAGGTTGATGGTTGATGATTCTTCTTTAAGGTGTGTGTTCCCTTGTGAAGGAAATGAAAGGCCAAGTCAAGGTCTCTCACTCTCTCTTAGTTCAACTAACCCTTCAAGTATTGGCTTACAATCTTTTGAGCTGAGACAAACTACCCAACATCATCATCAGCCACAACCTGGTTTGGGGTTCTTTGGAAAATCACATAATGTTCAACAGCACCAACAACAGCAGATTTTGCAAGATGCATACTTGGGTGCTAAAGCTGCAAGTGTTTATGAAGGTCATTTTTTCATCAAGGACTCAAAGTACTTGGTACCTGCACAGGAGCTTCTAAATGAGTTTTGTAGTTTGGGAACAAAGCAAAATGAGATGGTTATAAAGCAAAAGTTCAACAAGAACAAGCAGTGGGAAGATGATAGCAACAACGGTATTGGTTCCTCAAAGAAGCCTACTCTTACCTCTTTGGAGTTTATAGAGTTGCAGAAGAGAAAGACAAAGCTTCTGTCGATGCTTGAAGAGGTTGATAGAAGATACAAGCACTACCGTAATCAGATGAAGTCAGTGGTATCCTCTTTTGAAGCAGTAGCAGGGAATGGTGCAGCCACAGTGTATTCAGCTTTGGCTTTGAAAGCCATGTCAAGACATTTCAGGTGTTTGAAGGATGGGATTTTGGGGCAGATAGAAGCAACAAGGAAAAGCATGGGAGAGAAGGATCCAATAGCACCAGGCACAACAAGGGGTGAAACACCAAGGCTCAAAGTTATTGACCAAGCACTAAGACAACAAAGGGCCTTTCAGCAAATGACTATGATGGAAACTCATCCATGGAGACCCCAACGTGGCCTTCCTGAAAGATCTGTTTCTGTTCTAAGGGCTTGGCTTTTTGAGCATTTTCTCCATCCGTACCCAAGTGATGTTGATAAACATATTTTAGCACGTCAAACTGGTCTCTCTAGAAGTCAGGTATCAAATTGGTTTATTAATGCAAGGGTGAGGTTATGGAAGCCAATGGTGGAGGAAATGTACATAGAGGAAGTGAAGGAGCATGAAAATAATATGCTTAATTCCTCAGGTGGTAATGATGATCCTGATATGGAAGATAATATTAATCCAAATAATGTTCAAAACCAATTACCTTCTTCATCACTGCTTGAGGATCAAAAACCAATTCTTCAAATGGACTCAGTGTGTGCTTCTTCCATCATCAATAACCATAACACAGATAATAACAGAAACAATCCAACAAAGAACAACACTAAAACCCTTCACCACAACCACAATATGAATCCTCATGACCATGTCAGATTAATTGAGCCTAATTCCACCACCGACACATTCGGGTCAATGGAACTTGATTTTTCATCTTACAACCACCACCATTCTTCTTCTGGCATGGTTCCTTACACAACAAGCAATGAACAGAATGCAAACCATGGTTTCAATGGTGGCATTAGGGCTAGTGTTGTGTCTTTGACTCTAGGGTTACAACAACATGGTGAAAGTGGTGTGAGCCTAGGGTTCCCTTCAGTAACACATCAGAGTTCATTACTATACACAACAAGGGACCAGATTGAAGATTGTCAAACAATTCAGTACTCACTTCTTGATGGTGAAGGACAAAATCTTCAATATAGGAATTTGATGGGAGCACAATTGCTACATGACTTGGCAGGATAG 2106 0.4046 MAKQVCEETSRDMVSSSSAGFSYSDHVPPTHHLVNQIQGFVSDPDMFNLTSNMEMIGFHKNQLDHHQQQEECDRTMWNKSNNFFSKPGPSTSNKTMNESCTSFYEYNNNNNNHKPDFTTGISETTSNENLIIGSTTHADSAPWQENRLMVDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRQTTQHHHQPQPGLGFFGKSHNVQQHQQQQILQDAYLGAKAASVYEGHFFIKDSKYLVPAQELLNEFCSLGTKQNEMVIKQKFNKNKQWEDDSNNGIGSSKKPTLTSLEFIELQKRKTKLLSMLEEVDRRYKHYRNQMKSVVSSFEAVAGNGAATVYSALALKAMSRHFRCLKDGILGQIEATRKSMGEKDPIAPGTTRGETPRLKVIDQALRQQRAFQQMTMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYIEEVKEHENNMLNSSGGNDDPDMEDNINPNNVQNQLPSSSLLEDQKPILQMDSVCASSIINNHNTDNNRNNPTKNNTKTLHHNHNMNPHDHVRLIEPNSTTDTFGSMELDFSSYNHHHSSSGMVPYTTSNEQNANHGFNGGIRASVVSLTLGLQQHGESGVSLGFPSVTHQSSLLYTTRDQIEDCQTIQYSLLDGEGQNLQYRNLMGAQLLHDLAG* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0123 701 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 1 655 - -
Lan17g0123 701 ProSiteProfiles 'Homeobox' domain profile. 416 479 IPR001356 GO:0003677
Lan17g0123 701 SMART prehox3 235 368 IPR006563 -
Lan17g0123 701 CDD homeodomain 419 480 IPR001356 GO:0003677
Lan17g0123 701 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 655 - -
Lan17g0123 701 Gene3D - 422 484 - -
Lan17g0123 701 Pfam Homeobox KN domain 436 475 IPR008422 GO:0003677|GO:0006355
Lan17g0123 701 SUPERFAMILY Homeodomain-like 420 485 IPR009057 -
Lan17g0123 701 Pfam Associated with HOX 241 366 IPR006563 -
Lan17g0123 701 MobiDBLite consensus disorder prediction 498 522 - -
Lan17g0123 701 SMART HOX_1 419 483 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0123 Lan-Chr17 717634 721548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0123 145 700 Homeobox Transcription Factor Family AT5G41410 45.124 5.32e-133 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lan17g0123 POX 1.3e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0123 - - lang:109331282 1357.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0123 17 717634 721548 Lan6g0096 6 635349 639819 LSH
Lan17g0123 17 717634 721548 Lan18g0194 18 1816770 1821969 PCT
Lan1g1956 1 34823070 34825558 Lan17g0123 17 717634 721548 PCT