Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0120 ATGATCATTTCCGAGAAGAACCGTAAAGAGATCTCCAAATACCTCTTTCAAGAGGGAGTTTGCTATGCGAAGAAGGACTTCAATCTAGCAAAGCACCCGGAGATAGATGTGCCGAATCTCCAAGTGATTAAGTTGATGCAGAGTTTCAAGTCAAAGGAATATGTGAGGGAGACATTTGCTTGGATGCACTATTACTGGTTCCTCACCAATGATGGCATTGAGTTCCTTAGGACTTACCTCAATCTCCCTTCAGAGATTGTCCCTGCCACTCTTAAGAAGCAGGCTAAGCCAGCTGGCAGACCCTTCGGTGGCCCACCCGGAGATCGCCCTAGAGGCCCACCACGCTTTGATGGAGAAAGGAGATTTGGTGGTGACCGTGATGGGTACCGTGGAGGTCCTCGAGGACCTGGCGGTGACTTTGGAGGTGAGAAGGGTGGAGCTCCGGCTGACTACAGACCTTCTTTTGGGGGTCCTGGTGGAAGGTCTGGTTTTGGTCGTGGTGCAGGTGGTTATGGAGCACCCCCCAGCTCAAATGCTTAA 540 0.5111 MIISEKNRKEISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFDGERRFGGDRDGYRGGPRGPGGDFGGEKGGAPADYRPSFGGPGGRSGFGRGAGGYGAPPSSNA* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0120 179 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 178 - -
Lan17g0120 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
Lan17g0120 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 178 IPR037447 -
Lan17g0120 179 Gene3D - 1 104 IPR036388 -
Lan17g0120 179 MobiDBLite consensus disorder prediction 112 128 - -
Lan17g0120 179 MobiDBLite consensus disorder prediction 91 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0120 Lan-Chr17 698361 703400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0120 1 155 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 83.226 3.34e-75 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0120 K02947 K09422 csv:101212088 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0120 17 698361 703400 Lan18g1114 18 16147456 16149284 LSH
Lan17g0120 17 698361 703400 Lan6g0094 6 628245 630263 LSH