Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0106 ATGACAAAACTGCAGGAAATTGGAAAATGGTTAAGTACTATCCTACTCAGACCAAGAAACTACCAAGAAGGTTATTTTCAAGCAAAAGTTGCAGGTTTTGGCCTAACTTGTGTCAAGAACAATGACACTACTCAAAGATCAACCAGAAGTCCAAATAATGAGGAGTTTAACCCTTCTAGTTGGTATGCTCCGGAAATTCTAACTGAGCTAGAACAAACAAGAAATGCTTCAACATATTCCAAGTACTCAGAGAAAGCTGATGCATATAGCTTTGGAATGATATGCTTCGAGCTTTTAACAGGTAAAGTACCTTTCGAAGATAACCATCTTCAAGGGGATAGAACAAACCAAAAAATCAAAGCAGGGGAAAGGCCTTTGTTCCCATACCGTTCACCAAAATACCTTGTGAATTTGATCAAAAAGTGTTGGCAAACCGACCCTTCTCAACGTCCGACTTTCTCATCTATATGCCGAATTTTGCGATACATAAAAAAATTACTTTCAATGAACACAGAATTCCATGTTATCAATCCTGAACTTAATCAACTTGAGGCGCTGTCCCCACCTGTGGATTGTTGTGACATAGAAGCAATGTTCCTTAAGAATTTCCCAATTGATAGGCCATCTATTTTGTCATCAATATCACAAATACCATATGAAATGTTTGCTTATAAAGTTGTGGAGAAAGGGAAGATTATAAGTAATAGCAGCAATGCTAAAGATAACAAGTACATTGAGCCAACTAAGGATGAGGCTACATTGTCTAAGGAAGAAAATGATAAACAAAACATAGTTTGTGGAGATGATAATGCATCCATAGCAGAAAAGCTGCTCCAAGATCCATTCCCACTGATAACCATTCCAAAGCCGAATTGTGAAGACACAAAATCTGTTTGCTTTGACGCCCCGTCCAGGAAAAGTGTCAAAGTAAAGAAACCAGCACTAGACAAGTCCAAAAAAGACAAAGGAATACCAAAATTGCAGGCAACAAGATCATTGCCACCATCTTTACCTGGCCGAGGATTAAGGGTGCATAAGGCAAGTTCCTCGGTGTCATCCAGCCCTCTGAGCCCGGGTAAAAGAAGACCCTCCAATGTCTCAGAATCTTCAAAGATCAACAAACCATCAGTGTTAACTCCTTCCAGTTCCATTAGAAGAAAACAAACATCTGAGGCTCAAACATTAGATTCAAAGCCCAGTTTAAAGCTGAAAAGGGACCAGTCACCATTGTCCAAACATGACAATATCCCAGATTCTAATGTTACAACTTCAAAGAGGAAAAATCCACAACTTACACCAAGCCCTTCTATGAACTCAGCAAGATTGGGACGTGTAAGTACTACCCCTAATATGAAAGTGCAAAAGGGGTTCATGTATAGCACATTCACAAGCAGAAAAAATAGTCATCTCTCAGATTTGGATAAAACAAGAGGTAGATTATCACCACTTGCATTGAGTCCTTTAAGCCCATATATGACAAGAGGAAGAAAATATGGTCACCTTTCTGACTATAACAGTAGTTCTAAGACCAAAAGACAGAGCCTTTCACCATTAGTGTTGAGCCCTTTGAGCCCATATGCTCCAAGAAGAAGAACAAGTGGCCATGTCTCAGATTAA 1617 0.3921 MTKLQEIGKWLSTILLRPRNYQEGYFQAKVAGFGLTCVKNNDTTQRSTRSPNNEEFNPSSWYAPEILTELEQTRNASTYSKYSEKADAYSFGMICFELLTGKVPFEDNHLQGDRTNQKIKAGERPLFPYRSPKYLVNLIKKCWQTDPSQRPTFSSICRILRYIKKLLSMNTEFHVINPELNQLEALSPPVDCCDIEAMFLKNFPIDRPSILSSISQIPYEMFAYKVVEKGKIISNSSNAKDNKYIEPTKDEATLSKEENDKQNIVCGDDNASIAEKLLQDPFPLITIPKPNCEDTKSVCFDAPSRKSVKVKKPALDKSKKDKGIPKLQATRSLPPSLPGRGLRVHKASSSVSSSPLSPGKRRPSNVSESSKINKPSVLTPSSSIRRKQTSEAQTLDSKPSLKLKRDQSPLSKHDNIPDSNVTTSKRKNPQLTPSPSMNSARLGRVSTTPNMKVQKGFMYSTFTSRKNSHLSDLDKTRGRLSPLALSPLSPYMTRGRKYGHLSDYNSSSKTKRQSLSPLVLSPLSPYAPRRRTSGHVSD* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0106 538 MobiDBLite consensus disorder prediction 484 538 - -
Lan17g0106 538 MobiDBLite consensus disorder prediction 346 397 - -
Lan17g0106 538 ProSiteProfiles Protein kinase domain profile. 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0106 538 Pfam Protein tyrosine and serine/threonine kinase 27 159 IPR001245 GO:0004672|GO:0006468
Lan17g0106 538 MobiDBLite consensus disorder prediction 500 520 - -
Lan17g0106 538 MobiDBLite consensus disorder prediction 398 412 - -
Lan17g0106 538 MobiDBLite consensus disorder prediction 309 450 - -
Lan17g0106 538 MobiDBLite consensus disorder prediction 309 326 - -
Lan17g0106 538 SUPERFAMILY Protein kinase-like (PK-like) 25 184 IPR011009 -
Lan17g0106 538 Gene3D Transferase(Phosphotransferase) domain 1 14 186 - -
Lan17g0106 538 MobiDBLite consensus disorder prediction 413 450 - -
Lan17g0106 538 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 13 384 - -
Lan17g0106 538 PANTHER SERINE-THREONINE PROTEIN KINASE 13 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0106 Lan-Chr17 603120 606302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0106 29 182 MAP Kinase Kinase Kinase AT2G35050 31.613 2.69e-15 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Lan17g0106 PK_Tyr_Ser-Thr 1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0106 - - lang:109330774 1048.88