Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0104 ATGGACAAGAAACTTTCCAAAAATAAGCCAAAGATCTCCACAACAAGTACTTCAACCACAACCTCTGAAGAAGTGAACAGTAATGAGTGGGAATTCATAGATATGAACGAGCAAGAAGAGGATCTCATTCGCAGAATGTATGGCTTAGTTGGAGATAGGTGGGATTTGATAGCTGGTCGCATTCCAGGTCGCAAAGCAGAAGAAATAGAGAGATTCTGGATTATGAGACATGAATATGTTTTTTCTGTTCGAAGAAATTAA 261 0.387 MDKKLSKNKPKISTTSTSTTTSEEVNSNEWEFIDMNEQEEDLIRRMYGLVGDRWDLIAGRIPGRKAEEIERFWIMRHEYVFSVRRN* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0104 86 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 83 - -
Lan17g0104 86 MobiDBLite consensus disorder prediction 10 26 - -
Lan17g0104 86 MobiDBLite consensus disorder prediction 1 26 - -
Lan17g0104 86 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC3 1 83 - -
Lan17g0104 86 Gene3D - 36 76 - -
Lan17g0104 86 CDD SANT 35 73 IPR001005 -
Lan17g0104 86 SUPERFAMILY Homeodomain-like 36 74 IPR009057 -
Lan17g0104 86 SMART sant 31 79 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0104 Lan-Chr17 594974 596652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0104 35 73 MYB Transcription Factor Family AT5G52600 56.410 2.66e-11 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan17g0104 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0104 K09422 - gmx:100814431 114.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0104 17 594974 596652 Lan6g0082 6 552135 553762 LSH