Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0096 ATGAGATCATCAATGTTTCAAGAGGAAGGTTCATCTTCTGTAACTTCTTCACCTTTACAATTTTTCTCTATGATGTCGGTTTCACCCAGCATAGGTTCTCCATACACATGGCTTAGAGAAATGAAATCCGAGGAAAGGGGTTTGTGTTTGATCCATTTATTGCTCACTTGTGCAAAGCATGTAGCTGCTGGTAGTCTTGAAAATGCAAACATCACACTTGAGCAAATTTCTCAGCTCGCCTCGCCCGATGGCGATACTATGCAGCGAATTGCTACTTATTTTACTGAAGCACTCGCTGATCGGATGCTGAAATCGTGGCCTGGTATCCACAGGGCACTCAATTCTACCAAGATGGTTATGGTTTCGGAAGAAATGCTTGTCAAGAAGCTCTTCCTCGAGTTGTTCCCGTTCTTGAAAGTAGCGTATATTCTGACAAATCAGGCTATTGTTGAAGCGATGGAAGGGGAGAAAATGGTGCATATAATTGATCTCAATGCCTCCGAGCCTATGCAGTGGATTGCTCTCCTCCAAGTCTTGAATGTGCGTCCAGAAGGCCCTCCACATTTGAGAATTACCGGTGTTCATCAGCAGAAAGAGATTCTTGATCAGATGGCTCATAAACTTTCCGAAGAAGCAGAAAAGTTGGATATCCCGTTCCAATTCAATCCTGTAGTTAGCAAATTAGAAAATCTTGATTTCGACAGACTTCGAGTGAAAACCGGGGAGGCGCTAGCAATAAGTTCGTTTCTGCAATTGCATTCCCTTTTGGCCTTGGATGATGAAGCCTTGAGAAGAAAATCGCCTCTCATGTCAAAAAATTCACTGCAAAAGACTGTGCTGATGAACCAAAGCATGTTGGATGAATTGTCCGAGAAAGTTATGGTTAATGGCTATAGCCCAAGCCATGACTCAACCTCATCGTCACCTGTATCCTTAACCGCTTCAATTAATTCGGAGAGCTTTCTTAATGCCTTGTGGGCATTATCACCGAAGGTCATGGTTGTAGCAGAACAAGACTTCAATCATAATGGTTCGACATTGATGGAGAGGCTACTAGAAGCCCTATATTCTTATGCAGCATTATTTGATTGTTTGGAGTCCACTGTCTCAAGAGCGTCATTGGAGAGATTCAAGGTGGAGAATATGCTTTTCGGCAAAGAAATCAAGAACATTATTGCTTGTGAAGGGTTTGAAAGAAAGGAAAGACATGAGAAGCTGGATAAGTGGTTCCAAAGACTTGATTTCACCGGGTTTGGCAACGTGCCTTTAAGCTATTTCGGTATGTTGCAAGCAAGGAGGTTTCTACAGACTTATGGTTGCGAGGGATATAGGATGAAGGAAGAAAATGGTTGTGTAGTAATTTGCTGGCAGGACCGGTCCTTGTATTCGATATCGGCATGGAGATCAAGAAAGTAA 1416 0.4273 MRSSMFQEEGSSSVTSSPLQFFSMMSVSPSIGSPYTWLREMKSEERGLCLIHLLLTCAKHVAAGSLENANITLEQISQLASPDGDTMQRIATYFTEALADRMLKSWPGIHRALNSTKMVMVSEEMLVKKLFLELFPFLKVAYILTNQAIVEAMEGEKMVHIIDLNASEPMQWIALLQVLNVRPEGPPHLRITGVHQQKEILDQMAHKLSEEAEKLDIPFQFNPVVSKLENLDFDRLRVKTGEALAISSFLQLHSLLALDDEALRRKSPLMSKNSLQKTVLMNQSMLDELSEKVMVNGYSPSHDSTSSSPVSLTASINSESFLNALWALSPKVMVVAEQDFNHNGSTLMERLLEALYSYAALFDCLESTVSRASLERFKVENMLFGKEIKNIIACEGFERKERHEKLDKWFQRLDFTGFGNVPLSYFGMLQARRFLQTYGCEGYRMKEENGCVVICWQDRSLYSISAWRSRK* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0096 471 Pfam GRAS domain family 50 468 IPR005202 -
Lan17g0096 471 ProSiteProfiles GRAS family profile. 41 468 IPR005202 -
Lan17g0096 471 PANTHER SCARECROW-LIKE PROTEIN 3 6 470 IPR030008 GO:0003700|GO:0005634|GO:0009739
Lan17g0096 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 470 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0096 Lan-Chr17 540439 542700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0096 4 471 GRAS Transcription Factor Family AT1G50420 66.598 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan17g0096 GRAS 2.8e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0096 - - tcc:18589932 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0096 17 540439 542700 Lan18g1128 18 16223914 16226039 LSH